Protein–RNA interactions for Protein: O08983

Hps1, Hermansky-Pudlak syndrome 1 protein homolog, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hps1O08983 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Hps1O08983 Rps4l-201ENSMUST00000071745 943 ntBASIC14.06□□□□□ -0.16
Hps1O08983 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hps1O08983 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hps1O08983 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hps1O08983 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Hps1O08983 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hps1O08983 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hps1O08983 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hps1O08983 Gm6858-201ENSMUST00000208582 1468 ntBASIC14.06□□□□□ -0.16
Hps1O08983 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hps1O08983 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hps1O08983 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hps1O08983 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hps1O08983 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC14.05□□□□□ -0.16
Hps1O08983 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Hps1O08983 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hps1O08983 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hps1O08983 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
Hps1O08983 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Hps1O08983 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC14.05□□□□□ -0.16
Hps1O08983 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hps1O08983 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hps1O08983 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hps1O08983 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Hps1O08983 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
Hps1O08983 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Hps1O08983 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Hps1O08983 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hps1O08983 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hps1O08983 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hps1O08983 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Hps1O08983 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Hps1O08983 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hps1O08983 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hps1O08983 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Hps1O08983 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hps1O08983 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hps1O08983 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Hps1O08983 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hps1O08983 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hps1O08983 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hps1O08983 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Hps1O08983 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC14.05□□□□□ -0.16
Hps1O08983 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Hps1O08983 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Hps1O08983 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
Hps1O08983 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hps1O08983 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hps1O08983 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hps1O08983 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hps1O08983 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC14.04□□□□□ -0.16
Hps1O08983 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hps1O08983 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC14.04□□□□□ -0.16
Hps1O08983 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hps1O08983 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hps1O08983 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC14.04□□□□□ -0.16
Hps1O08983 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hps1O08983 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hps1O08983 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hps1O08983 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC14.04□□□□□ -0.16
Hps1O08983 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC14.04□□□□□ -0.16
Hps1O08983 Gm1818-201ENSMUST00000169406 1184 ntBASIC14.04□□□□□ -0.16
Hps1O08983 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hps1O08983 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC14.04□□□□□ -0.16
Hps1O08983 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Hps1O08983 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Hps1O08983 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC14.04□□□□□ -0.16
Hps1O08983 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hps1O08983 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hps1O08983 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hps1O08983 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hps1O08983 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hps1O08983 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hps1O08983 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hps1O08983 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hps1O08983 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hps1O08983 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Hps1O08983 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Hps1O08983 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Hps1O08983 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hps1O08983 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC14.03□□□□□ -0.16
Hps1O08983 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC14.03□□□□□ -0.16
Hps1O08983 Gm12644-201ENSMUST00000119935 606 ntBASIC14.03□□□□□ -0.16
Hps1O08983 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Hps1O08983 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC14.03□□□□□ -0.16
Hps1O08983 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC14.03□□□□□ -0.16
Hps1O08983 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC14.03□□□□□ -0.16
Hps1O08983 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC14.03□□□□□ -0.16
Hps1O08983 AC108846.1-201ENSMUST00000214531 513 ntBASIC14.03□□□□□ -0.16
Hps1O08983 AC161829.1-201ENSMUST00000220298 281 ntBASIC14.03□□□□□ -0.16
Hps1O08983 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hps1O08983 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hps1O08983 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hps1O08983 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hps1O08983 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Hps1O08983 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Hps1O08983 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hps1O08983 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hps1O08983 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms