Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
Trove2O08848 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC15.55■□□□□ 0.08
Trove2O08848 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC15.55■□□□□ 0.08
Trove2O08848 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trove2O08848 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC15.55■□□□□ 0.08
Trove2O08848 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC15.55■□□□□ 0.08
Trove2O08848 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trove2O08848 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trove2O08848 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trove2O08848 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC15.55■□□□□ 0.08
Trove2O08848 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC15.55■□□□□ 0.08
Trove2O08848 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trove2O08848 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trove2O08848 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trove2O08848 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
Trove2O08848 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trove2O08848 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
Trove2O08848 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Trove2O08848 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trove2O08848 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trove2O08848 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trove2O08848 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trove2O08848 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trove2O08848 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trove2O08848 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trove2O08848 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC15.54■□□□□ 0.08
Trove2O08848 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trove2O08848 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
Trove2O08848 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC15.54■□□□□ 0.08
Trove2O08848 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trove2O08848 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trove2O08848 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trove2O08848 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Trove2O08848 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trove2O08848 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trove2O08848 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC15.54■□□□□ 0.08
Trove2O08848 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
Trove2O08848 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trove2O08848 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trove2O08848 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trove2O08848 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
Trove2O08848 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trove2O08848 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trove2O08848 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trove2O08848 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Trove2O08848 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trove2O08848 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trove2O08848 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Trove2O08848 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trove2O08848 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
Trove2O08848 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trove2O08848 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trove2O08848 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trove2O08848 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trove2O08848 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trove2O08848 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trove2O08848 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trove2O08848 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trove2O08848 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trove2O08848 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trove2O08848 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trove2O08848 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trove2O08848 Gm43399-201ENSMUST00000202546 2374 ntBASIC15.53■□□□□ 0.08
Trove2O08848 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trove2O08848 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC15.53■□□□□ 0.08
Trove2O08848 AC130713.1-201ENSMUST00000228853 1096 ntBASIC15.53■□□□□ 0.08
Trove2O08848 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trove2O08848 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trove2O08848 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trove2O08848 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trove2O08848 Gm12620-201ENSMUST00000119791 1986 ntBASIC15.53■□□□□ 0.08
Trove2O08848 Gm12612-201ENSMUST00000140182 1986 ntBASIC15.53■□□□□ 0.08
Trove2O08848 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trove2O08848 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trove2O08848 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trove2O08848 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trove2O08848 Gm43697-201ENSMUST00000199637 2581 ntBASIC15.52■□□□□ 0.08
Trove2O08848 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trove2O08848 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trove2O08848 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Trove2O08848 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Trove2O08848 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trove2O08848 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trove2O08848 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trove2O08848 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trove2O08848 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.08
Trove2O08848 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Trove2O08848 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trove2O08848 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trove2O08848 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC15.52■□□□□ 0.08
Trove2O08848 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trove2O08848 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Trove2O08848 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Trove2O08848 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trove2O08848 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.07
Trove2O08848 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trove2O08848 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC15.52■□□□□ 0.07
Trove2O08848 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trove2O08848 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trove2O08848 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 83.2 ms