Protein–RNA interactions for Protein: J3QNR8

Trim34b, Tripartite motif-containing 34B, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34bJ3QNR8 AC154767.3-201ENSMUST00000225150 1342 ntBASIC18.44■□□□□ 0.54
Trim34bJ3QNR8 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim34bJ3QNR8 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim34bJ3QNR8 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim34bJ3QNR8 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim34bJ3QNR8 Gm8242-201ENSMUST00000193029 1420 ntBASIC18.43■□□□□ 0.54
Trim34bJ3QNR8 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim34bJ3QNR8 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim34bJ3QNR8 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Trim34bJ3QNR8 Gm7336-201ENSMUST00000107041 1232 ntBASIC18.43■□□□□ 0.54
Trim34bJ3QNR8 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim34bJ3QNR8 Gm7063-201ENSMUST00000186840 981 ntBASIC18.43■□□□□ 0.54
Trim34bJ3QNR8 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC18.43■□□□□ 0.54
Trim34bJ3QNR8 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim34bJ3QNR8 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC18.43■□□□□ 0.54
Trim34bJ3QNR8 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim34bJ3QNR8 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim34bJ3QNR8 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim34bJ3QNR8 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim34bJ3QNR8 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim34bJ3QNR8 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Trim34bJ3QNR8 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim34bJ3QNR8 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim34bJ3QNR8 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim34bJ3QNR8 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim34bJ3QNR8 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim34bJ3QNR8 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim34bJ3QNR8 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim34bJ3QNR8 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim34bJ3QNR8 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim34bJ3QNR8 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim34bJ3QNR8 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim34bJ3QNR8 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim34bJ3QNR8 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Trim34bJ3QNR8 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim34bJ3QNR8 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim34bJ3QNR8 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim34bJ3QNR8 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim34bJ3QNR8 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim34bJ3QNR8 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC18.42■□□□□ 0.54
Trim34bJ3QNR8 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim34bJ3QNR8 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC18.42■□□□□ 0.54
Trim34bJ3QNR8 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim34bJ3QNR8 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim34bJ3QNR8 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Trim34bJ3QNR8 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim34bJ3QNR8 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim34bJ3QNR8 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim34bJ3QNR8 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim34bJ3QNR8 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim34bJ3QNR8 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Trim34bJ3QNR8 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Trim34bJ3QNR8 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim34bJ3QNR8 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim34bJ3QNR8 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim34bJ3QNR8 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Trim34bJ3QNR8 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim34bJ3QNR8 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Trim34bJ3QNR8 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
Trim34bJ3QNR8 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC18.41■□□□□ 0.54
Trim34bJ3QNR8 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim34bJ3QNR8 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Trim34bJ3QNR8 Prob1-201ENSMUST00000097619 3021 ntBASIC18.41■□□□□ 0.54
Trim34bJ3QNR8 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim34bJ3QNR8 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC18.41■□□□□ 0.54
Trim34bJ3QNR8 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Trim34bJ3QNR8 Gm20949-201ENSMUST00000206478 952 ntBASIC18.41■□□□□ 0.54
Trim34bJ3QNR8 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC18.41■□□□□ 0.54
Trim34bJ3QNR8 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim34bJ3QNR8 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim34bJ3QNR8 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Trim34bJ3QNR8 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Trim34bJ3QNR8 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim34bJ3QNR8 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim34bJ3QNR8 AC069562.2-201ENSMUST00000224644 2146 ntBASIC18.41■□□□□ 0.54
Trim34bJ3QNR8 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim34bJ3QNR8 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC18.41■□□□□ 0.54
Trim34bJ3QNR8 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim34bJ3QNR8 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim34bJ3QNR8 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Trim34bJ3QNR8 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim34bJ3QNR8 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim34bJ3QNR8 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Trim34bJ3QNR8 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC18.4■□□□□ 0.54
Trim34bJ3QNR8 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Trim34bJ3QNR8 Gm9824-201ENSMUST00000178707 561 ntBASIC18.4■□□□□ 0.54
Trim34bJ3QNR8 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Trim34bJ3QNR8 Mir7023-201ENSMUST00000185093 64 ntBASIC18.4■□□□□ 0.54
Trim34bJ3QNR8 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim34bJ3QNR8 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Trim34bJ3QNR8 Gm42934-201ENSMUST00000196920 1345 ntBASIC18.4■□□□□ 0.54
Trim34bJ3QNR8 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC18.39■□□□□ 0.54
Trim34bJ3QNR8 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Trim34bJ3QNR8 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Trim34bJ3QNR8 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Trim34bJ3QNR8 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Trim34bJ3QNR8 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.54
Trim34bJ3QNR8 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
Trim34bJ3QNR8 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Trim34bJ3QNR8 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms