Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Gm21873-201ENSMUST00000186728 696 ntBASIC14.88□□□□□ -0.03
Col6a3E9PWQ3 Gm21794-201ENSMUST00000187056 696 ntBASIC14.88□□□□□ -0.03
Col6a3E9PWQ3 Gm21880-201ENSMUST00000187275 696 ntBASIC14.88□□□□□ -0.03
Col6a3E9PWQ3 Gm21826-201ENSMUST00000187451 696 ntBASIC14.88□□□□□ -0.03
Col6a3E9PWQ3 Gm21198-201ENSMUST00000188393 696 ntBASIC14.88□□□□□ -0.03
Col6a3E9PWQ3 Gm21749-201ENSMUST00000189343 696 ntBASIC14.88□□□□□ -0.03
Col6a3E9PWQ3 Gm21901-201ENSMUST00000189568 696 ntBASIC14.88□□□□□ -0.03
Col6a3E9PWQ3 Gm29424-201ENSMUST00000189716 696 ntBASIC14.88□□□□□ -0.03
Col6a3E9PWQ3 Gm28599-201ENSMUST00000189838 694 ntBASIC14.88□□□□□ -0.03
Col6a3E9PWQ3 Gm21867-201ENSMUST00000189917 696 ntBASIC14.88□□□□□ -0.03
Col6a3E9PWQ3 Gm29269-201ENSMUST00000190087 696 ntBASIC14.88□□□□□ -0.03
Col6a3E9PWQ3 Gm21722-201ENSMUST00000190153 696 ntBASIC14.88□□□□□ -0.03
Col6a3E9PWQ3 Gm28423-201ENSMUST00000190701 696 ntBASIC14.88□□□□□ -0.03
Col6a3E9PWQ3 Gm21899-201ENSMUST00000190745 696 ntBASIC14.88□□□□□ -0.03
Col6a3E9PWQ3 Gm21910-201ENSMUST00000191163 696 ntBASIC14.88□□□□□ -0.03
Col6a3E9PWQ3 Gm21849-201ENSMUST00000191571 696 ntBASIC14.88□□□□□ -0.03
Col6a3E9PWQ3 Gm28678-201ENSMUST00000191593 696 ntBASIC14.88□□□□□ -0.03
Col6a3E9PWQ3 Gm20910-201ENSMUST00000193268 696 ntBASIC14.88□□□□□ -0.03
Col6a3E9PWQ3 Gm21871-201ENSMUST00000194621 696 ntBASIC14.88□□□□□ -0.03
Col6a3E9PWQ3 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col6a3E9PWQ3 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col6a3E9PWQ3 Abhd11os-203ENSMUST00000222613 363 ntBASIC14.88□□□□□ -0.03
Col6a3E9PWQ3 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col6a3E9PWQ3 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col6a3E9PWQ3 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col6a3E9PWQ3 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Col6a3E9PWQ3 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col6a3E9PWQ3 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col6a3E9PWQ3 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Col6a3E9PWQ3 Gm24644-201ENSMUST00000157114 139 ntBASIC14.87□□□□□ -0.03
Col6a3E9PWQ3 Gm7287-201ENSMUST00000205267 602 ntBASIC14.87□□□□□ -0.03
Col6a3E9PWQ3 AC156560.2-201ENSMUST00000221232 264 ntBASIC14.87□□□□□ -0.03
Col6a3E9PWQ3 AC149588.3-201ENSMUST00000227515 150 ntBASIC14.87□□□□□ -0.03
Col6a3E9PWQ3 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col6a3E9PWQ3 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col6a3E9PWQ3 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col6a3E9PWQ3 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col6a3E9PWQ3 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col6a3E9PWQ3 Gm6203-201ENSMUST00000209575 1342 ntBASIC14.87□□□□□ -0.03
Col6a3E9PWQ3 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col6a3E9PWQ3 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Col6a3E9PWQ3 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col6a3E9PWQ3 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Col6a3E9PWQ3 Gm8959-201ENSMUST00000213150 571 ntBASIC14.87□□□□□ -0.03
Col6a3E9PWQ3 Cts7-204ENSMUST00000225321 1257 ntBASIC14.87□□□□□ -0.03
Col6a3E9PWQ3 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col6a3E9PWQ3 Gm44207-201ENSMUST00000204568 1424 ntBASIC14.87□□□□□ -0.03
Col6a3E9PWQ3 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col6a3E9PWQ3 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col6a3E9PWQ3 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col6a3E9PWQ3 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC14.86□□□□□ -0.03
Col6a3E9PWQ3 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC14.86□□□□□ -0.03
Col6a3E9PWQ3 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC14.86□□□□□ -0.03
Col6a3E9PWQ3 Mrps34-201ENSMUST00000043907 918 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col6a3E9PWQ3 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col6a3E9PWQ3 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col6a3E9PWQ3 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC14.86□□□□□ -0.03
Col6a3E9PWQ3 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col6a3E9PWQ3 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col6a3E9PWQ3 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col6a3E9PWQ3 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col6a3E9PWQ3 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC14.86□□□□□ -0.03
Col6a3E9PWQ3 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col6a3E9PWQ3 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC14.86□□□□□ -0.03
Col6a3E9PWQ3 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC14.86□□□□□ -0.03
Col6a3E9PWQ3 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col6a3E9PWQ3 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Col6a3E9PWQ3 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col6a3E9PWQ3 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col6a3E9PWQ3 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col6a3E9PWQ3 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col6a3E9PWQ3 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Col6a3E9PWQ3 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col6a3E9PWQ3 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col6a3E9PWQ3 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
Col6a3E9PWQ3 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col6a3E9PWQ3 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col6a3E9PWQ3 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Col6a3E9PWQ3 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col6a3E9PWQ3 AC166574.6-201ENSMUST00000227889 1806 ntBASIC14.85□□□□□ -0.03
Col6a3E9PWQ3 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col6a3E9PWQ3 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Col6a3E9PWQ3 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Col6a3E9PWQ3 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col6a3E9PWQ3 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col6a3E9PWQ3 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col6a3E9PWQ3 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col6a3E9PWQ3 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC14.85□□□□□ -0.03
Col6a3E9PWQ3 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col6a3E9PWQ3 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
Col6a3E9PWQ3 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col6a3E9PWQ3 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC14.85□□□□□ -0.03
Col6a3E9PWQ3 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Col6a3E9PWQ3 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC14.85□□□□□ -0.03
Col6a3E9PWQ3 Gm8597-201ENSMUST00000191525 1109 ntBASIC14.85□□□□□ -0.03
Col6a3E9PWQ3 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col6a3E9PWQ3 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC14.85□□□□□ -0.03
Col6a3E9PWQ3 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Col6a3E9PWQ3 Gm10339-203ENSMUST00000225409 1671 ntBASIC14.85□□□□□ -0.03
Col6a3E9PWQ3 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC14.85□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms