Protein–RNA interactions for Protein: A7VMS2

Gm11127, MHC classIb T15, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11127A7VMS2 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Gm11127A7VMS2 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Gm11127A7VMS2 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Gm11127A7VMS2 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC13.43□□□□□ -0.26
Gm11127A7VMS2 Gm11950-201ENSMUST00000121615 838 ntBASIC13.43□□□□□ -0.26
Gm11127A7VMS2 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Gm11127A7VMS2 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Gm11127A7VMS2 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Gm11127A7VMS2 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC13.43□□□□□ -0.26
Gm11127A7VMS2 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC13.43□□□□□ -0.26
Gm11127A7VMS2 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC13.43□□□□□ -0.26
Gm11127A7VMS2 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Gm11127A7VMS2 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Gm11127A7VMS2 AC114585.2-202ENSMUST00000228094 426 ntBASIC13.43□□□□□ -0.26
Gm11127A7VMS2 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Gm11127A7VMS2 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Gm11127A7VMS2 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Gm11127A7VMS2 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Gm11127A7VMS2 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Gm11127A7VMS2 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Gm11127A7VMS2 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Gm11127A7VMS2 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Gm11127A7VMS2 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Gm11127A7VMS2 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Gm11127A7VMS2 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
Gm11127A7VMS2 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Gm11127A7VMS2 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Gm11127A7VMS2 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Gm11127A7VMS2 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC13.42□□□□□ -0.26
Gm11127A7VMS2 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Gm11127A7VMS2 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Gm11127A7VMS2 Gm23634-201ENSMUST00000175071 91 ntBASIC13.42□□□□□ -0.26
Gm11127A7VMS2 Gm17808-201ENSMUST00000200859 894 ntBASIC13.42□□□□□ -0.26
Gm11127A7VMS2 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Gm11127A7VMS2 AC125350.1-201ENSMUST00000225115 903 ntBASIC13.42□□□□□ -0.26
Gm11127A7VMS2 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
Gm11127A7VMS2 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC13.42□□□□□ -0.26
Gm11127A7VMS2 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Gm11127A7VMS2 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC13.42□□□□□ -0.26
Gm11127A7VMS2 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
Gm11127A7VMS2 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Gm11127A7VMS2 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC13.42□□□□□ -0.26
Gm11127A7VMS2 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Gm11127A7VMS2 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Gm11127A7VMS2 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Gm11127A7VMS2 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Gm11127A7VMS2 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Gm11127A7VMS2 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Gm11127A7VMS2 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Gm11127A7VMS2 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Gm11127A7VMS2 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Gm11127A7VMS2 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC13.41□□□□□ -0.26
Gm11127A7VMS2 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Gm11127A7VMS2 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Gm11127A7VMS2 Gm43509-201ENSMUST00000196551 2594 ntBASIC13.41□□□□□ -0.26
Gm11127A7VMS2 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC13.41□□□□□ -0.26
Gm11127A7VMS2 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Gm11127A7VMS2 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Gm11127A7VMS2 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Gm11127A7VMS2 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC13.41□□□□□ -0.26
Gm11127A7VMS2 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Gm11127A7VMS2 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC13.41□□□□□ -0.26
Gm11127A7VMS2 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Gm11127A7VMS2 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Gm11127A7VMS2 Gm25016-201ENSMUST00000158399 131 ntBASIC13.41□□□□□ -0.26
Gm11127A7VMS2 Gm6728-201ENSMUST00000178117 1065 ntBASIC13.41□□□□□ -0.26
Gm11127A7VMS2 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Gm11127A7VMS2 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Gm11127A7VMS2 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Gm11127A7VMS2 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Gm11127A7VMS2 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Gm11127A7VMS2 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Gm11127A7VMS2 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Gm11127A7VMS2 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Gm11127A7VMS2 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Gm11127A7VMS2 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Gm11127A7VMS2 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Gm11127A7VMS2 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Gm11127A7VMS2 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Gm11127A7VMS2 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Gm11127A7VMS2 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Gm11127A7VMS2 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Gm11127A7VMS2 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Gm11127A7VMS2 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Gm11127A7VMS2 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Gm11127A7VMS2 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Gm11127A7VMS2 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Gm11127A7VMS2 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC13.4□□□□□ -0.26
Gm11127A7VMS2 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Gm11127A7VMS2 AC122901.1-201ENSMUST00000214203 1790 ntBASIC13.4□□□□□ -0.26
Gm11127A7VMS2 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Gm11127A7VMS2 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Gm11127A7VMS2 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Gm11127A7VMS2 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Gm11127A7VMS2 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Gm11127A7VMS2 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Gm11127A7VMS2 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Gm11127A7VMS2 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Gm11127A7VMS2 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Gm11127A7VMS2 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms