Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cfap99A0A140LIX9 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Cfap99A0A140LIX9 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cfap99A0A140LIX9 Gm13597-201ENSMUST00000121239 375 ntBASIC18.07■□□□□ 0.48
Cfap99A0A140LIX9 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cfap99A0A140LIX9 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cfap99A0A140LIX9 Gm27301-201ENSMUST00000184012 127 ntBASIC18.07■□□□□ 0.48
Cfap99A0A140LIX9 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC18.07■□□□□ 0.48
Cfap99A0A140LIX9 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Cfap99A0A140LIX9 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC18.07■□□□□ 0.48
Cfap99A0A140LIX9 AC127302.2-201ENSMUST00000215212 268 ntBASIC18.07■□□□□ 0.48
Cfap99A0A140LIX9 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Cfap99A0A140LIX9 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cfap99A0A140LIX9 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cfap99A0A140LIX9 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Cfap99A0A140LIX9 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cfap99A0A140LIX9 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cfap99A0A140LIX9 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cfap99A0A140LIX9 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cfap99A0A140LIX9 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Cfap99A0A140LIX9 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cfap99A0A140LIX9 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Cfap99A0A140LIX9 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cfap99A0A140LIX9 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cfap99A0A140LIX9 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cfap99A0A140LIX9 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cfap99A0A140LIX9 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cfap99A0A140LIX9 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cfap99A0A140LIX9 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Cfap99A0A140LIX9 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cfap99A0A140LIX9 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC18.06■□□□□ 0.48
Cfap99A0A140LIX9 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cfap99A0A140LIX9 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC18.06■□□□□ 0.48
Cfap99A0A140LIX9 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Cfap99A0A140LIX9 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Cfap99A0A140LIX9 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cfap99A0A140LIX9 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Cfap99A0A140LIX9 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Cfap99A0A140LIX9 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Cfap99A0A140LIX9 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Cfap99A0A140LIX9 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cfap99A0A140LIX9 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Cfap99A0A140LIX9 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cfap99A0A140LIX9 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cfap99A0A140LIX9 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cfap99A0A140LIX9 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cfap99A0A140LIX9 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Cfap99A0A140LIX9 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cfap99A0A140LIX9 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Cfap99A0A140LIX9 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cfap99A0A140LIX9 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Cfap99A0A140LIX9 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cfap99A0A140LIX9 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cfap99A0A140LIX9 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cfap99A0A140LIX9 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cfap99A0A140LIX9 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cfap99A0A140LIX9 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
Cfap99A0A140LIX9 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cfap99A0A140LIX9 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Cfap99A0A140LIX9 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cfap99A0A140LIX9 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC18.05■□□□□ 0.48
Cfap99A0A140LIX9 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC18.05■□□□□ 0.48
Cfap99A0A140LIX9 AC122024.2-201ENSMUST00000220086 871 ntBASIC18.05■□□□□ 0.48
Cfap99A0A140LIX9 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC18.05■□□□□ 0.48
Cfap99A0A140LIX9 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC18.05■□□□□ 0.48
Cfap99A0A140LIX9 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cfap99A0A140LIX9 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cfap99A0A140LIX9 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cfap99A0A140LIX9 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cfap99A0A140LIX9 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cfap99A0A140LIX9 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cfap99A0A140LIX9 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Cfap99A0A140LIX9 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Cfap99A0A140LIX9 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC18.05■□□□□ 0.48
Cfap99A0A140LIX9 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cfap99A0A140LIX9 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Cfap99A0A140LIX9 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
Cfap99A0A140LIX9 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cfap99A0A140LIX9 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cfap99A0A140LIX9 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cfap99A0A140LIX9 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cfap99A0A140LIX9 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cfap99A0A140LIX9 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cfap99A0A140LIX9 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC18.04■□□□□ 0.48
Cfap99A0A140LIX9 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC18.04■□□□□ 0.48
Cfap99A0A140LIX9 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cfap99A0A140LIX9 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cfap99A0A140LIX9 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cfap99A0A140LIX9 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Cfap99A0A140LIX9 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cfap99A0A140LIX9 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Cfap99A0A140LIX9 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC18.04■□□□□ 0.48
Cfap99A0A140LIX9 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cfap99A0A140LIX9 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cfap99A0A140LIX9 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
Cfap99A0A140LIX9 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Cfap99A0A140LIX9 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC18.04■□□□□ 0.48
Cfap99A0A140LIX9 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC18.04■□□□□ 0.48
Cfap99A0A140LIX9 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cfap99A0A140LIX9 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms