Protein–RNA interactions for Protein: A0A0G2JFS9

Atg4a-ps, Cysteine protease, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4a-psA0A0G2JFS9 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC18.35■□□□□ 0.53
Atg4a-psA0A0G2JFS9 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Atg4a-psA0A0G2JFS9 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Atg4a-psA0A0G2JFS9 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Atg4a-psA0A0G2JFS9 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Atg4a-psA0A0G2JFS9 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Atg4a-psA0A0G2JFS9 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Atg4a-psA0A0G2JFS9 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
Atg4a-psA0A0G2JFS9 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Atg4a-psA0A0G2JFS9 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Atg4a-psA0A0G2JFS9 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC18.34■□□□□ 0.53
Atg4a-psA0A0G2JFS9 Gm44945-201ENSMUST00000206764 1187 ntBASIC18.34■□□□□ 0.53
Atg4a-psA0A0G2JFS9 Gm44771-201ENSMUST00000206975 626 ntBASIC18.34■□□□□ 0.53
Atg4a-psA0A0G2JFS9 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Atg4a-psA0A0G2JFS9 CT010506.4-201ENSMUST00000225457 351 ntBASIC18.34■□□□□ 0.53
Atg4a-psA0A0G2JFS9 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Atg4a-psA0A0G2JFS9 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Atg4a-psA0A0G2JFS9 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Atg4a-psA0A0G2JFS9 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Atg4a-psA0A0G2JFS9 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Atg4a-psA0A0G2JFS9 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
Atg4a-psA0A0G2JFS9 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Atg4a-psA0A0G2JFS9 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Atg4a-psA0A0G2JFS9 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Atg4a-psA0A0G2JFS9 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Atg4a-psA0A0G2JFS9 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Atg4a-psA0A0G2JFS9 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Atg4a-psA0A0G2JFS9 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Atg4a-psA0A0G2JFS9 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Atg4a-psA0A0G2JFS9 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Atg4a-psA0A0G2JFS9 AC131586.3-201ENSMUST00000228355 1367 ntBASIC18.33■□□□□ 0.53
Atg4a-psA0A0G2JFS9 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Atg4a-psA0A0G2JFS9 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Atg4a-psA0A0G2JFS9 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC18.33■□□□□ 0.52
Atg4a-psA0A0G2JFS9 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC18.33■□□□□ 0.52
Atg4a-psA0A0G2JFS9 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Atg4a-psA0A0G2JFS9 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Atg4a-psA0A0G2JFS9 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Atg4a-psA0A0G2JFS9 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Atg4a-psA0A0G2JFS9 Gm5177-201ENSMUST00000183092 997 ntBASIC18.33■□□□□ 0.52
Atg4a-psA0A0G2JFS9 Gm7229-201ENSMUST00000214719 1007 ntBASIC18.33■□□□□ 0.52
Atg4a-psA0A0G2JFS9 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC18.33■□□□□ 0.52
Atg4a-psA0A0G2JFS9 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Atg4a-psA0A0G2JFS9 Sybu-209ENSMUST00000228639 4113 ntBASIC18.33■□□□□ 0.52
Atg4a-psA0A0G2JFS9 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Atg4a-psA0A0G2JFS9 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Atg4a-psA0A0G2JFS9 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Atg4a-psA0A0G2JFS9 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Atg4a-psA0A0G2JFS9 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Atg4a-psA0A0G2JFS9 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Atg4a-psA0A0G2JFS9 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Atg4a-psA0A0G2JFS9 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Atg4a-psA0A0G2JFS9 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Atg4a-psA0A0G2JFS9 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Atg4a-psA0A0G2JFS9 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC18.32■□□□□ 0.52
Atg4a-psA0A0G2JFS9 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Atg4a-psA0A0G2JFS9 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Atg4a-psA0A0G2JFS9 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Atg4a-psA0A0G2JFS9 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Atg4a-psA0A0G2JFS9 Gm9727-201ENSMUST00000161387 555 ntBASIC18.32■□□□□ 0.52
Atg4a-psA0A0G2JFS9 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC18.32■□□□□ 0.52
Atg4a-psA0A0G2JFS9 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC18.32■□□□□ 0.52
Atg4a-psA0A0G2JFS9 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC18.32■□□□□ 0.52
Atg4a-psA0A0G2JFS9 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Atg4a-psA0A0G2JFS9 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Atg4a-psA0A0G2JFS9 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Atg4a-psA0A0G2JFS9 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Atg4a-psA0A0G2JFS9 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Atg4a-psA0A0G2JFS9 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Atg4a-psA0A0G2JFS9 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Atg4a-psA0A0G2JFS9 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Atg4a-psA0A0G2JFS9 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Atg4a-psA0A0G2JFS9 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC18.32■□□□□ 0.52
Atg4a-psA0A0G2JFS9 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Atg4a-psA0A0G2JFS9 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Atg4a-psA0A0G2JFS9 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Atg4a-psA0A0G2JFS9 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Atg4a-psA0A0G2JFS9 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Atg4a-psA0A0G2JFS9 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Atg4a-psA0A0G2JFS9 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Atg4a-psA0A0G2JFS9 Carlr-201ENSMUST00000181515 2574 ntBASIC18.31■□□□□ 0.52
Atg4a-psA0A0G2JFS9 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Atg4a-psA0A0G2JFS9 Gm16198-201ENSMUST00000118766 670 ntBASIC18.31■□□□□ 0.52
Atg4a-psA0A0G2JFS9 Gm27525-201ENSMUST00000184465 107 ntBASIC18.31■□□□□ 0.52
Atg4a-psA0A0G2JFS9 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC18.31■□□□□ 0.52
Atg4a-psA0A0G2JFS9 AC159295.1-201ENSMUST00000225326 940 ntBASIC18.31■□□□□ 0.52
Atg4a-psA0A0G2JFS9 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Atg4a-psA0A0G2JFS9 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Atg4a-psA0A0G2JFS9 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Atg4a-psA0A0G2JFS9 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC18.31■□□□□ 0.52
Atg4a-psA0A0G2JFS9 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Atg4a-psA0A0G2JFS9 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC18.31■□□□□ 0.52
Atg4a-psA0A0G2JFS9 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Atg4a-psA0A0G2JFS9 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Atg4a-psA0A0G2JFS9 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Atg4a-psA0A0G2JFS9 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC18.31■□□□□ 0.52
Atg4a-psA0A0G2JFS9 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Atg4a-psA0A0G2JFS9 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Atg4a-psA0A0G2JFS9 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Atg4a-psA0A0G2JFS9 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms