Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC11.02□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC11.01□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC11.01□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC11.01□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC11.01□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC11.01□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC11.01□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC11.01□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Gm17971-201ENSMUST00000190239 806 ntBASIC11.01□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC11.01□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC11.01□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Gm6376-201ENSMUST00000209407 580 ntBASIC11.01□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC11.01□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC11.01□□□□□ -0.65
Trav9n-2A0A0G2JDP3 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC11.01□□□□□ -0.65
Trav9n-2A0A0G2JDP3 AC154757.1-201ENSMUST00000228289 336 ntBASIC11.01□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC11.01□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav9n-2A0A0G2JDP3 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC11.01□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Gm18856-201ENSMUST00000178096 1374 ntBASIC11.01□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC11□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Trav9n-2A0A0G2JDP3 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav9n-2A0A0G2JDP3 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC11□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC11□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Gm11452-201ENSMUST00000122376 690 ntBASIC11□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC11□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav9n-2A0A0G2JDP3 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC11□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trav9n-2A0A0G2JDP3 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Gm9867-201ENSMUST00000192212 2647 ntBASIC11□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC11□□□□□ -0.65
Trav9n-2A0A0G2JDP3 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Gm37500-201ENSMUST00000192059 1443 ntBASIC11□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC10.99□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav9n-2A0A0G2JDP3 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav9n-2A0A0G2JDP3 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms