Protein–RNA interactions for Protein: A0A0B4J1P8

Trbv13-1, T cell receptor beta, variable 13-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-1A0A0B4J1P8 Gm6550-201ENSMUST00000187574 993 ntBASIC11.3□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC11.3□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC11.3□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC11.3□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Trbv13-1A0A0B4J1P8 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC11.3□□□□□ -0.6
Trbv13-1A0A0B4J1P8 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC11.3□□□□□ -0.6
Trbv13-1A0A0B4J1P8 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC11.3□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC11.3□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC11.3□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC11.3□□□□□ -0.6
Trbv13-1A0A0B4J1P8 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trbv13-1A0A0B4J1P8 AC154527.4-201ENSMUST00000224364 1667 ntBASIC11.3□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Gm43598-201ENSMUST00000202482 2479 ntBASIC11.29□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC11.29□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC11.29□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC11.29□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC11.29□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC11.29□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC11.29□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC11.29□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Gm27525-201ENSMUST00000184465 107 ntBASIC11.29□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trbv13-1A0A0B4J1P8 AV026068-213ENSMUST00000223675 1171 ntBASIC11.29□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Gm15590-201ENSMUST00000078419 552 ntBASIC11.29□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC11.29□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC11.29□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Gm7222-201ENSMUST00000117512 906 ntBASIC11.28□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC11.28□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC11.28□□□□□ -0.6
Trbv13-1A0A0B4J1P8 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Gm5364-201ENSMUST00000216789 889 ntBASIC11.28□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Gm18622-201ENSMUST00000219361 595 ntBASIC11.28□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trbv13-1A0A0B4J1P8 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC11.28□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trbv13-1A0A0B4J1P8 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 93.9 ms