Protein–RNA interactions for Protein: A0A0A6YY41

Ighv1-47, Immunoglobulin heavy variable 1-47 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-47A0A0A6YY41 Gm8097-201ENSMUST00000117903 829 ntBASIC12.51□□□□□ -0.41
Ighv1-47A0A0A6YY41 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Ighv1-47A0A0A6YY41 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC12.51□□□□□ -0.41
Ighv1-47A0A0A6YY41 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ighv1-47A0A0A6YY41 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
Ighv1-47A0A0A6YY41 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ighv1-47A0A0A6YY41 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ighv1-47A0A0A6YY41 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ighv1-47A0A0A6YY41 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC12.51□□□□□ -0.41
Ighv1-47A0A0A6YY41 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ighv1-47A0A0A6YY41 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ighv1-47A0A0A6YY41 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ighv1-47A0A0A6YY41 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC12.51□□□□□ -0.41
Ighv1-47A0A0A6YY41 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ighv1-47A0A0A6YY41 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Ighv1-47A0A0A6YY41 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Ighv1-47A0A0A6YY41 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ighv1-47A0A0A6YY41 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Ighv1-47A0A0A6YY41 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ighv1-47A0A0A6YY41 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ighv1-47A0A0A6YY41 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ighv1-47A0A0A6YY41 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ighv1-47A0A0A6YY41 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Ighv1-47A0A0A6YY41 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ighv1-47A0A0A6YY41 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ighv1-47A0A0A6YY41 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ighv1-47A0A0A6YY41 Gm14722-201ENSMUST00000118943 689 ntBASIC12.5□□□□□ -0.41
Ighv1-47A0A0A6YY41 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ighv1-47A0A0A6YY41 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ighv1-47A0A0A6YY41 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC12.5□□□□□ -0.41
Ighv1-47A0A0A6YY41 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ighv1-47A0A0A6YY41 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC12.5□□□□□ -0.41
Ighv1-47A0A0A6YY41 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC12.5□□□□□ -0.41
Ighv1-47A0A0A6YY41 AC160338.1-201ENSMUST00000214232 705 ntBASIC12.5□□□□□ -0.41
Ighv1-47A0A0A6YY41 AC130671.1-201ENSMUST00000227384 1237 ntBASIC12.5□□□□□ -0.41
Ighv1-47A0A0A6YY41 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ighv1-47A0A0A6YY41 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ighv1-47A0A0A6YY41 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ighv1-47A0A0A6YY41 Gm13337-201ENSMUST00000119183 1594 ntBASIC12.5□□□□□ -0.41
Ighv1-47A0A0A6YY41 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ighv1-47A0A0A6YY41 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ighv1-47A0A0A6YY41 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ighv1-47A0A0A6YY41 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ighv1-47A0A0A6YY41 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ighv1-47A0A0A6YY41 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ighv1-47A0A0A6YY41 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ighv1-47A0A0A6YY41 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ighv1-47A0A0A6YY41 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ighv1-47A0A0A6YY41 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ighv1-47A0A0A6YY41 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ighv1-47A0A0A6YY41 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ighv1-47A0A0A6YY41 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC12.49□□□□□ -0.41
Ighv1-47A0A0A6YY41 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
Ighv1-47A0A0A6YY41 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Ighv1-47A0A0A6YY41 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Ighv1-47A0A0A6YY41 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Ighv1-47A0A0A6YY41 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Ighv1-47A0A0A6YY41 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Ighv1-47A0A0A6YY41 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ighv1-47A0A0A6YY41 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ighv1-47A0A0A6YY41 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ighv1-47A0A0A6YY41 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC12.49□□□□□ -0.41
Ighv1-47A0A0A6YY41 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
Ighv1-47A0A0A6YY41 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC12.49□□□□□ -0.41
Ighv1-47A0A0A6YY41 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ighv1-47A0A0A6YY41 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC12.49□□□□□ -0.41
Ighv1-47A0A0A6YY41 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ighv1-47A0A0A6YY41 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ighv1-47A0A0A6YY41 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ighv1-47A0A0A6YY41 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ighv1-47A0A0A6YY41 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ighv1-47A0A0A6YY41 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ighv1-47A0A0A6YY41 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC12.49□□□□□ -0.41
Ighv1-47A0A0A6YY41 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
Ighv1-47A0A0A6YY41 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ighv1-47A0A0A6YY41 Gm10459-201ENSMUST00000202708 1155 ntBASIC12.49□□□□□ -0.41
Ighv1-47A0A0A6YY41 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC12.49□□□□□ -0.41
Ighv1-47A0A0A6YY41 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC12.49□□□□□ -0.41
Ighv1-47A0A0A6YY41 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC12.49□□□□□ -0.41
Ighv1-47A0A0A6YY41 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ighv1-47A0A0A6YY41 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Ighv1-47A0A0A6YY41 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ighv1-47A0A0A6YY41 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ighv1-47A0A0A6YY41 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ighv1-47A0A0A6YY41 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ighv1-47A0A0A6YY41 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ighv1-47A0A0A6YY41 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ighv1-47A0A0A6YY41 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ighv1-47A0A0A6YY41 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ighv1-47A0A0A6YY41 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ighv1-47A0A0A6YY41 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ighv1-47A0A0A6YY41 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ighv1-47A0A0A6YY41 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ighv1-47A0A0A6YY41 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC12.49□□□□□ -0.41
Ighv1-47A0A0A6YY41 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ighv1-47A0A0A6YY41 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Ighv1-47A0A0A6YY41 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ighv1-47A0A0A6YY41 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Ighv1-47A0A0A6YY41 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ighv1-47A0A0A6YY41 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms