Protein–RNA interactions for Protein: A0A0A6YWV4

Trbc1, T cell receptor beta, constant region 1 (Fragment), mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbc1A0A0A6YWV4 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC13.92□□□□□ -0.18
Trbc1A0A0A6YWV4 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trbc1A0A0A6YWV4 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trbc1A0A0A6YWV4 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC13.92□□□□□ -0.18
Trbc1A0A0A6YWV4 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trbc1A0A0A6YWV4 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trbc1A0A0A6YWV4 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trbc1A0A0A6YWV4 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Trbc1A0A0A6YWV4 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trbc1A0A0A6YWV4 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Trbc1A0A0A6YWV4 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trbc1A0A0A6YWV4 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
Trbc1A0A0A6YWV4 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trbc1A0A0A6YWV4 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trbc1A0A0A6YWV4 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC13.91□□□□□ -0.18
Trbc1A0A0A6YWV4 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC13.91□□□□□ -0.18
Trbc1A0A0A6YWV4 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trbc1A0A0A6YWV4 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Trbc1A0A0A6YWV4 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trbc1A0A0A6YWV4 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trbc1A0A0A6YWV4 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trbc1A0A0A6YWV4 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC13.91□□□□□ -0.18
Trbc1A0A0A6YWV4 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC13.91□□□□□ -0.18
Trbc1A0A0A6YWV4 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trbc1A0A0A6YWV4 Psmb5-202ENSMUST00000227257 622 ntBASIC13.91□□□□□ -0.18
Trbc1A0A0A6YWV4 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trbc1A0A0A6YWV4 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trbc1A0A0A6YWV4 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trbc1A0A0A6YWV4 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC13.91□□□□□ -0.18
Trbc1A0A0A6YWV4 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trbc1A0A0A6YWV4 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC13.91□□□□□ -0.18
Trbc1A0A0A6YWV4 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trbc1A0A0A6YWV4 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trbc1A0A0A6YWV4 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC13.91□□□□□ -0.18
Trbc1A0A0A6YWV4 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trbc1A0A0A6YWV4 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trbc1A0A0A6YWV4 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Trbc1A0A0A6YWV4 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trbc1A0A0A6YWV4 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
Trbc1A0A0A6YWV4 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trbc1A0A0A6YWV4 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Trbc1A0A0A6YWV4 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trbc1A0A0A6YWV4 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC13.9□□□□□ -0.18
Trbc1A0A0A6YWV4 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trbc1A0A0A6YWV4 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trbc1A0A0A6YWV4 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trbc1A0A0A6YWV4 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Trbc1A0A0A6YWV4 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trbc1A0A0A6YWV4 Gm44291-201ENSMUST00000203102 2865 ntBASIC13.9□□□□□ -0.18
Trbc1A0A0A6YWV4 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trbc1A0A0A6YWV4 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trbc1A0A0A6YWV4 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Trbc1A0A0A6YWV4 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trbc1A0A0A6YWV4 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trbc1A0A0A6YWV4 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trbc1A0A0A6YWV4 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trbc1A0A0A6YWV4 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Trbc1A0A0A6YWV4 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Trbc1A0A0A6YWV4 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC13.9□□□□□ -0.18
Trbc1A0A0A6YWV4 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC13.9□□□□□ -0.18
Trbc1A0A0A6YWV4 Gm43935-201ENSMUST00000203569 1050 ntBASIC13.9□□□□□ -0.18
Trbc1A0A0A6YWV4 AW822252-206ENSMUST00000208904 237 ntBASIC13.9□□□□□ -0.18
Trbc1A0A0A6YWV4 AC154222.1-201ENSMUST00000223882 475 ntBASIC13.9□□□□□ -0.18
Trbc1A0A0A6YWV4 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trbc1A0A0A6YWV4 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Trbc1A0A0A6YWV4 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trbc1A0A0A6YWV4 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trbc1A0A0A6YWV4 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC13.9□□□□□ -0.18
Trbc1A0A0A6YWV4 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trbc1A0A0A6YWV4 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Trbc1A0A0A6YWV4 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trbc1A0A0A6YWV4 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Trbc1A0A0A6YWV4 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trbc1A0A0A6YWV4 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
Trbc1A0A0A6YWV4 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trbc1A0A0A6YWV4 Sybu-209ENSMUST00000228639 4113 ntBASIC13.9□□□□□ -0.18
Trbc1A0A0A6YWV4 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC13.9□□□□□ -0.18
Trbc1A0A0A6YWV4 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trbc1A0A0A6YWV4 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Trbc1A0A0A6YWV4 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trbc1A0A0A6YWV4 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC13.9□□□□□ -0.19
Trbc1A0A0A6YWV4 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC13.89□□□□□ -0.19
Trbc1A0A0A6YWV4 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trbc1A0A0A6YWV4 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trbc1A0A0A6YWV4 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Trbc1A0A0A6YWV4 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trbc1A0A0A6YWV4 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trbc1A0A0A6YWV4 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trbc1A0A0A6YWV4 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trbc1A0A0A6YWV4 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trbc1A0A0A6YWV4 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trbc1A0A0A6YWV4 Gm14140-201ENSMUST00000119999 995 ntBASIC13.89□□□□□ -0.19
Trbc1A0A0A6YWV4 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trbc1A0A0A6YWV4 Gm45167-201ENSMUST00000208007 322 ntBASIC13.89□□□□□ -0.19
Trbc1A0A0A6YWV4 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Trbc1A0A0A6YWV4 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trbc1A0A0A6YWV4 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trbc1A0A0A6YWV4 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trbc1A0A0A6YWV4 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trbc1A0A0A6YWV4 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 61.2 ms