Protein–RNA interactions for Protein: A0A075B6B5

Trav6-5, T cell receptor alpha variable 6-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-5A0A075B6B5 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav6-5A0A075B6B5 AC166574.6-201ENSMUST00000227889 1806 ntBASIC11.72□□□□□ -0.53
Trav6-5A0A075B6B5 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav6-5A0A075B6B5 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav6-5A0A075B6B5 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav6-5A0A075B6B5 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav6-5A0A075B6B5 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav6-5A0A075B6B5 CT030684.3-201ENSMUST00000227308 2445 ntBASIC11.71□□□□□ -0.53
Trav6-5A0A075B6B5 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav6-5A0A075B6B5 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC11.71□□□□□ -0.53
Trav6-5A0A075B6B5 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC11.71□□□□□ -0.53
Trav6-5A0A075B6B5 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav6-5A0A075B6B5 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav6-5A0A075B6B5 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav6-5A0A075B6B5 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav6-5A0A075B6B5 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trav6-5A0A075B6B5 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav6-5A0A075B6B5 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav6-5A0A075B6B5 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav6-5A0A075B6B5 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav6-5A0A075B6B5 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav6-5A0A075B6B5 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC11.71□□□□□ -0.53
Trav6-5A0A075B6B5 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav6-5A0A075B6B5 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav6-5A0A075B6B5 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Trav6-5A0A075B6B5 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC11.71□□□□□ -0.53
Trav6-5A0A075B6B5 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav6-5A0A075B6B5 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.54
Trav6-5A0A075B6B5 CT025610.1-201ENSMUST00000224552 1786 ntBASIC11.71□□□□□ -0.54
Trav6-5A0A075B6B5 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC11.71□□□□□ -0.54
Trav6-5A0A075B6B5 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC11.71□□□□□ -0.54
Trav6-5A0A075B6B5 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav6-5A0A075B6B5 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav6-5A0A075B6B5 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC11.71□□□□□ -0.54
Trav6-5A0A075B6B5 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Trav6-5A0A075B6B5 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC11.71□□□□□ -0.54
Trav6-5A0A075B6B5 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Trav6-5A0A075B6B5 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav6-5A0A075B6B5 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC11.71□□□□□ -0.54
Trav6-5A0A075B6B5 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav6-5A0A075B6B5 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav6-5A0A075B6B5 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC11.7□□□□□ -0.54
Trav6-5A0A075B6B5 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav6-5A0A075B6B5 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav6-5A0A075B6B5 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav6-5A0A075B6B5 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav6-5A0A075B6B5 Gm42471-201ENSMUST00000201457 1865 ntBASIC11.7□□□□□ -0.54
Trav6-5A0A075B6B5 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav6-5A0A075B6B5 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav6-5A0A075B6B5 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC11.7□□□□□ -0.54
Trav6-5A0A075B6B5 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav6-5A0A075B6B5 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav6-5A0A075B6B5 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav6-5A0A075B6B5 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC11.7□□□□□ -0.54
Trav6-5A0A075B6B5 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav6-5A0A075B6B5 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav6-5A0A075B6B5 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav6-5A0A075B6B5 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav6-5A0A075B6B5 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC11.7□□□□□ -0.54
Trav6-5A0A075B6B5 Gm715-201ENSMUST00000117865 831 ntBASIC11.7□□□□□ -0.54
Trav6-5A0A075B6B5 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav6-5A0A075B6B5 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav6-5A0A075B6B5 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC11.7□□□□□ -0.54
Trav6-5A0A075B6B5 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav6-5A0A075B6B5 AC135963.1-201ENSMUST00000211640 717 ntBASIC11.7□□□□□ -0.54
Trav6-5A0A075B6B5 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav6-5A0A075B6B5 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav6-5A0A075B6B5 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC11.7□□□□□ -0.54
Trav6-5A0A075B6B5 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC11.7□□□□□ -0.54
Trav6-5A0A075B6B5 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Trav6-5A0A075B6B5 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Trav6-5A0A075B6B5 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav6-5A0A075B6B5 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav6-5A0A075B6B5 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav6-5A0A075B6B5 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav6-5A0A075B6B5 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav6-5A0A075B6B5 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav6-5A0A075B6B5 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav6-5A0A075B6B5 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav6-5A0A075B6B5 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav6-5A0A075B6B5 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC11.7□□□□□ -0.54
Trav6-5A0A075B6B5 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav6-5A0A075B6B5 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav6-5A0A075B6B5 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav6-5A0A075B6B5 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav6-5A0A075B6B5 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Trav6-5A0A075B6B5 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Trav6-5A0A075B6B5 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav6-5A0A075B6B5 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav6-5A0A075B6B5 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav6-5A0A075B6B5 Carlr-201ENSMUST00000181515 2574 ntBASIC11.69□□□□□ -0.54
Trav6-5A0A075B6B5 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav6-5A0A075B6B5 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav6-5A0A075B6B5 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav6-5A0A075B6B5 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav6-5A0A075B6B5 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav6-5A0A075B6B5 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC11.69□□□□□ -0.54
Trav6-5A0A075B6B5 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav6-5A0A075B6B5 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC11.69□□□□□ -0.54
Trav6-5A0A075B6B5 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC11.69□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms