Protein–RNA interactions for Protein: A0A075B699

Trav9d-1, T cell receptor alpha variable 9D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-1A0A075B699 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav9d-1A0A075B699 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav9d-1A0A075B699 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav9d-1A0A075B699 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav9d-1A0A075B699 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav9d-1A0A075B699 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav9d-1A0A075B699 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav9d-1A0A075B699 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav9d-1A0A075B699 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav9d-1A0A075B699 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Trav9d-1A0A075B699 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Trav9d-1A0A075B699 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Trav9d-1A0A075B699 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC11.68□□□□□ -0.54
Trav9d-1A0A075B699 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav9d-1A0A075B699 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav9d-1A0A075B699 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC11.68□□□□□ -0.54
Trav9d-1A0A075B699 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav9d-1A0A075B699 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav9d-1A0A075B699 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav9d-1A0A075B699 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav9d-1A0A075B699 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav9d-1A0A075B699 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav9d-1A0A075B699 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav9d-1A0A075B699 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Trav9d-1A0A075B699 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
Trav9d-1A0A075B699 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav9d-1A0A075B699 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC11.68□□□□□ -0.54
Trav9d-1A0A075B699 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav9d-1A0A075B699 Gm12497-201ENSMUST00000138778 237 ntBASIC11.68□□□□□ -0.54
Trav9d-1A0A075B699 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC11.68□□□□□ -0.54
Trav9d-1A0A075B699 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Trav9d-1A0A075B699 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC11.68□□□□□ -0.54
Trav9d-1A0A075B699 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav9d-1A0A075B699 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav9d-1A0A075B699 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav9d-1A0A075B699 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav9d-1A0A075B699 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav9d-1A0A075B699 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Trav9d-1A0A075B699 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Trav9d-1A0A075B699 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav9d-1A0A075B699 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Trav9d-1A0A075B699 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav9d-1A0A075B699 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Trav9d-1A0A075B699 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav9d-1A0A075B699 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav9d-1A0A075B699 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav9d-1A0A075B699 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Trav9d-1A0A075B699 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC11.68□□□□□ -0.54
Trav9d-1A0A075B699 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav9d-1A0A075B699 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav9d-1A0A075B699 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav9d-1A0A075B699 Gm14780-201ENSMUST00000118387 2737 ntBASIC11.67□□□□□ -0.54
Trav9d-1A0A075B699 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC11.67□□□□□ -0.54
Trav9d-1A0A075B699 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav9d-1A0A075B699 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC11.67□□□□□ -0.54
Trav9d-1A0A075B699 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Trav9d-1A0A075B699 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav9d-1A0A075B699 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav9d-1A0A075B699 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav9d-1A0A075B699 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Trav9d-1A0A075B699 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav9d-1A0A075B699 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Trav9d-1A0A075B699 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC11.67□□□□□ -0.54
Trav9d-1A0A075B699 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
Trav9d-1A0A075B699 Gm14859-201ENSMUST00000117752 357 ntBASIC11.67□□□□□ -0.54
Trav9d-1A0A075B699 Gm14722-201ENSMUST00000118943 689 ntBASIC11.67□□□□□ -0.54
Trav9d-1A0A075B699 Gm8344-201ENSMUST00000119813 856 ntBASIC11.67□□□□□ -0.54
Trav9d-1A0A075B699 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav9d-1A0A075B699 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav9d-1A0A075B699 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC11.67□□□□□ -0.54
Trav9d-1A0A075B699 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav9d-1A0A075B699 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC11.67□□□□□ -0.54
Trav9d-1A0A075B699 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Trav9d-1A0A075B699 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav9d-1A0A075B699 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC11.67□□□□□ -0.54
Trav9d-1A0A075B699 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav9d-1A0A075B699 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav9d-1A0A075B699 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav9d-1A0A075B699 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav9d-1A0A075B699 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav9d-1A0A075B699 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav9d-1A0A075B699 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Trav9d-1A0A075B699 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav9d-1A0A075B699 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav9d-1A0A075B699 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC11.67□□□□□ -0.54
Trav9d-1A0A075B699 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav9d-1A0A075B699 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav9d-1A0A075B699 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav9d-1A0A075B699 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav9d-1A0A075B699 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav9d-1A0A075B699 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav9d-1A0A075B699 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav9d-1A0A075B699 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav9d-1A0A075B699 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav9d-1A0A075B699 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav9d-1A0A075B699 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav9d-1A0A075B699 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav9d-1A0A075B699 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav9d-1A0A075B699 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC11.66□□□□□ -0.54
Trav9d-1A0A075B699 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms