Protein–RNA interactions for Protein: A0A075B633

Trav8n-2, T cell receptor alpha variable 8n-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8n-2A0A075B633 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav8n-2A0A075B633 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav8n-2A0A075B633 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trav8n-2A0A075B633 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav8n-2A0A075B633 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav8n-2A0A075B633 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Trav8n-2A0A075B633 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav8n-2A0A075B633 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Trav8n-2A0A075B633 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC13.8□□□□□ -0.2
Trav8n-2A0A075B633 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC13.8□□□□□ -0.2
Trav8n-2A0A075B633 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trav8n-2A0A075B633 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trav8n-2A0A075B633 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav8n-2A0A075B633 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC13.79□□□□□ -0.2
Trav8n-2A0A075B633 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav8n-2A0A075B633 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav8n-2A0A075B633 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Trav8n-2A0A075B633 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav8n-2A0A075B633 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav8n-2A0A075B633 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav8n-2A0A075B633 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav8n-2A0A075B633 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav8n-2A0A075B633 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trav8n-2A0A075B633 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trav8n-2A0A075B633 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC13.79□□□□□ -0.2
Trav8n-2A0A075B633 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC13.79□□□□□ -0.2
Trav8n-2A0A075B633 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC13.79□□□□□ -0.2
Trav8n-2A0A075B633 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trav8n-2A0A075B633 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC13.79□□□□□ -0.2
Trav8n-2A0A075B633 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav8n-2A0A075B633 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC13.79□□□□□ -0.2
Trav8n-2A0A075B633 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav8n-2A0A075B633 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav8n-2A0A075B633 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav8n-2A0A075B633 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav8n-2A0A075B633 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav8n-2A0A075B633 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav8n-2A0A075B633 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trav8n-2A0A075B633 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trav8n-2A0A075B633 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav8n-2A0A075B633 AC131743.5-201ENSMUST00000220775 1618 ntBASIC13.79□□□□□ -0.2
Trav8n-2A0A075B633 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC13.78□□□□□ -0.2
Trav8n-2A0A075B633 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Trav8n-2A0A075B633 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav8n-2A0A075B633 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav8n-2A0A075B633 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav8n-2A0A075B633 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC13.78□□□□□ -0.2
Trav8n-2A0A075B633 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav8n-2A0A075B633 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav8n-2A0A075B633 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav8n-2A0A075B633 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trav8n-2A0A075B633 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
Trav8n-2A0A075B633 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav8n-2A0A075B633 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav8n-2A0A075B633 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Trav8n-2A0A075B633 Ighv8-7-201ENSMUST00000194349 297 ntBASIC13.78□□□□□ -0.2
Trav8n-2A0A075B633 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav8n-2A0A075B633 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav8n-2A0A075B633 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav8n-2A0A075B633 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Trav8n-2A0A075B633 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC13.78□□□□□ -0.2
Trav8n-2A0A075B633 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC13.78□□□□□ -0.2
Trav8n-2A0A075B633 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav8n-2A0A075B633 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav8n-2A0A075B633 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav8n-2A0A075B633 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav8n-2A0A075B633 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav8n-2A0A075B633 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav8n-2A0A075B633 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav8n-2A0A075B633 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav8n-2A0A075B633 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Trav8n-2A0A075B633 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Trav8n-2A0A075B633 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Trav8n-2A0A075B633 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
Trav8n-2A0A075B633 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Trav8n-2A0A075B633 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Trav8n-2A0A075B633 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trav8n-2A0A075B633 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trav8n-2A0A075B633 Gm13015-201ENSMUST00000118674 204 ntBASIC13.77□□□□□ -0.21
Trav8n-2A0A075B633 Gm6539-201ENSMUST00000119157 1064 ntBASIC13.77□□□□□ -0.21
Trav8n-2A0A075B633 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav8n-2A0A075B633 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC13.77□□□□□ -0.21
Trav8n-2A0A075B633 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trav8n-2A0A075B633 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC13.77□□□□□ -0.21
Trav8n-2A0A075B633 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
Trav8n-2A0A075B633 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Trav8n-2A0A075B633 Gm28630-201ENSMUST00000187806 498 ntBASIC13.77□□□□□ -0.21
Trav8n-2A0A075B633 Gm29541-201ENSMUST00000191351 678 ntBASIC13.77□□□□□ -0.21
Trav8n-2A0A075B633 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC13.77□□□□□ -0.21
Trav8n-2A0A075B633 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Trav8n-2A0A075B633 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav8n-2A0A075B633 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC13.77□□□□□ -0.21
Trav8n-2A0A075B633 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav8n-2A0A075B633 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav8n-2A0A075B633 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav8n-2A0A075B633 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Trav8n-2A0A075B633 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav8n-2A0A075B633 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav8n-2A0A075B633 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC13.77□□□□□ -0.21
Trav8n-2A0A075B633 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms