Protein–RNA interactions for Protein: A0A075B624

Trav15d-1-dv6d-1, T cell receptor alpha variable 15D-1-DV6D-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-1-dv6d-1A0A075B624 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC12.88□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Gm45504-201ENSMUST00000211407 2107 ntBASIC12.88□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Gm12620-201ENSMUST00000119791 1986 ntBASIC12.87□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Gm12612-201ENSMUST00000140182 1986 ntBASIC12.87□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC12.87□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC12.87□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Gm8344-201ENSMUST00000119813 856 ntBASIC12.87□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Gm25016-201ENSMUST00000158399 131 ntBASIC12.87□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC12.87□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Gm44454-201ENSMUST00000198541 138 ntBASIC12.87□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC12.87□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC12.86□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Gm17808-201ENSMUST00000200859 894 ntBASIC12.86□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Vti1a-206ENSMUST00000225529 1244 ntBASIC12.86□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC12.85□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav15d-1-dv6d-1A0A075B624 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms