Protein–RNA interactions for Protein: A0A075B617

Trav16d-dv11, T cell receptor alpha variable 16D-DV11 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16d-dv11A0A075B617 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav16d-dv11A0A075B617 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav16d-dv11A0A075B617 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Trav16d-dv11A0A075B617 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav16d-dv11A0A075B617 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trav16d-dv11A0A075B617 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC11.13□□□□□ -0.63
Trav16d-dv11A0A075B617 Gm12441-201ENSMUST00000121806 588 ntBASIC11.13□□□□□ -0.63
Trav16d-dv11A0A075B617 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trav16d-dv11A0A075B617 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC11.13□□□□□ -0.63
Trav16d-dv11A0A075B617 Gm10052-201ENSMUST00000168019 960 ntBASIC11.13□□□□□ -0.63
Trav16d-dv11A0A075B617 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav16d-dv11A0A075B617 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Trav16d-dv11A0A075B617 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC11.13□□□□□ -0.63
Trav16d-dv11A0A075B617 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC11.13□□□□□ -0.63
Trav16d-dv11A0A075B617 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav16d-dv11A0A075B617 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav16d-dv11A0A075B617 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav16d-dv11A0A075B617 Gm7729-201ENSMUST00000050143 801 ntBASIC11.13□□□□□ -0.63
Trav16d-dv11A0A075B617 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav16d-dv11A0A075B617 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Trav16d-dv11A0A075B617 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Trav16d-dv11A0A075B617 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav16d-dv11A0A075B617 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav16d-dv11A0A075B617 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav16d-dv11A0A075B617 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Trav16d-dv11A0A075B617 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav16d-dv11A0A075B617 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav16d-dv11A0A075B617 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trav16d-dv11A0A075B617 Prkcz2-201ENSMUST00000206136 1756 ntBASIC11.13□□□□□ -0.63
Trav16d-dv11A0A075B617 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trav16d-dv11A0A075B617 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav16d-dv11A0A075B617 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav16d-dv11A0A075B617 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav16d-dv11A0A075B617 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav16d-dv11A0A075B617 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav16d-dv11A0A075B617 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Trav16d-dv11A0A075B617 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav16d-dv11A0A075B617 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav16d-dv11A0A075B617 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav16d-dv11A0A075B617 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav16d-dv11A0A075B617 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC11.12□□□□□ -0.63
Trav16d-dv11A0A075B617 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav16d-dv11A0A075B617 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav16d-dv11A0A075B617 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav16d-dv11A0A075B617 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC11.12□□□□□ -0.63
Trav16d-dv11A0A075B617 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav16d-dv11A0A075B617 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav16d-dv11A0A075B617 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC11.12□□□□□ -0.63
Trav16d-dv11A0A075B617 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trav16d-dv11A0A075B617 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
Trav16d-dv11A0A075B617 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC11.12□□□□□ -0.63
Trav16d-dv11A0A075B617 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC11.12□□□□□ -0.63
Trav16d-dv11A0A075B617 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC11.12□□□□□ -0.63
Trav16d-dv11A0A075B617 AC127302.2-201ENSMUST00000215212 268 ntBASIC11.12□□□□□ -0.63
Trav16d-dv11A0A075B617 Gm7213-201ENSMUST00000215977 950 ntBASIC11.12□□□□□ -0.63
Trav16d-dv11A0A075B617 AC122351.1-201ENSMUST00000220467 126 ntBASIC11.12□□□□□ -0.63
Trav16d-dv11A0A075B617 AC135637.1-201ENSMUST00000227750 365 ntBASIC11.12□□□□□ -0.63
Trav16d-dv11A0A075B617 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav16d-dv11A0A075B617 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav16d-dv11A0A075B617 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Trav16d-dv11A0A075B617 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trav16d-dv11A0A075B617 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav16d-dv11A0A075B617 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav16d-dv11A0A075B617 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Trav16d-dv11A0A075B617 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trav16d-dv11A0A075B617 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Trav16d-dv11A0A075B617 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav16d-dv11A0A075B617 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav16d-dv11A0A075B617 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav16d-dv11A0A075B617 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Trav16d-dv11A0A075B617 Gm43205-201ENSMUST00000198622 1968 ntBASIC11.12□□□□□ -0.63
Trav16d-dv11A0A075B617 Gm38318-201ENSMUST00000195769 1706 ntBASIC11.12□□□□□ -0.63
Trav16d-dv11A0A075B617 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trav16d-dv11A0A075B617 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav16d-dv11A0A075B617 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav16d-dv11A0A075B617 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC11.12□□□□□ -0.63
Trav16d-dv11A0A075B617 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Trav16d-dv11A0A075B617 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Trav16d-dv11A0A075B617 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Trav16d-dv11A0A075B617 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav16d-dv11A0A075B617 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav16d-dv11A0A075B617 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav16d-dv11A0A075B617 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav16d-dv11A0A075B617 Gm45779-201ENSMUST00000212189 4064 ntBASIC11.11□□□□□ -0.63
Trav16d-dv11A0A075B617 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Trav16d-dv11A0A075B617 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav16d-dv11A0A075B617 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Trav16d-dv11A0A075B617 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Trav16d-dv11A0A075B617 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav16d-dv11A0A075B617 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Trav16d-dv11A0A075B617 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav16d-dv11A0A075B617 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav16d-dv11A0A075B617 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Trav16d-dv11A0A075B617 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav16d-dv11A0A075B617 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav16d-dv11A0A075B617 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav16d-dv11A0A075B617 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav16d-dv11A0A075B617 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav16d-dv11A0A075B617 Gm44430-201ENSMUST00000203376 995 ntBASIC11.11□□□□□ -0.63
Trav16d-dv11A0A075B617 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms