Protein–RNA interactions for Protein: A0A075B615

Trav4n-4, T cell receptor alpha variable 4D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4n-4A0A075B615 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav4n-4A0A075B615 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav4n-4A0A075B615 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC10.5□□□□□ -0.73
Trav4n-4A0A075B615 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC10.5□□□□□ -0.73
Trav4n-4A0A075B615 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav4n-4A0A075B615 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Trav4n-4A0A075B615 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav4n-4A0A075B615 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav4n-4A0A075B615 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Trav4n-4A0A075B615 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav4n-4A0A075B615 Gm9947-201ENSMUST00000067599 2920 ntBASIC10.5□□□□□ -0.73
Trav4n-4A0A075B615 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Trav4n-4A0A075B615 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav4n-4A0A075B615 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav4n-4A0A075B615 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav4n-4A0A075B615 Gm13148-201ENSMUST00000118892 745 ntBASIC10.5□□□□□ -0.73
Trav4n-4A0A075B615 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav4n-4A0A075B615 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Trav4n-4A0A075B615 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Trav4n-4A0A075B615 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Trav4n-4A0A075B615 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav4n-4A0A075B615 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
Trav4n-4A0A075B615 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
Trav4n-4A0A075B615 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC10.5□□□□□ -0.73
Trav4n-4A0A075B615 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Trav4n-4A0A075B615 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav4n-4A0A075B615 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav4n-4A0A075B615 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Trav4n-4A0A075B615 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav4n-4A0A075B615 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav4n-4A0A075B615 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav4n-4A0A075B615 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
Trav4n-4A0A075B615 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC10.5□□□□□ -0.73
Trav4n-4A0A075B615 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav4n-4A0A075B615 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Trav4n-4A0A075B615 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC10.5□□□□□ -0.73
Trav4n-4A0A075B615 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav4n-4A0A075B615 Prkcz2-201ENSMUST00000206136 1756 ntBASIC10.49□□□□□ -0.73
Trav4n-4A0A075B615 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav4n-4A0A075B615 Gm7712-202ENSMUST00000222331 1510 ntBASIC10.49□□□□□ -0.73
Trav4n-4A0A075B615 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav4n-4A0A075B615 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav4n-4A0A075B615 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC10.49□□□□□ -0.73
Trav4n-4A0A075B615 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav4n-4A0A075B615 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Trav4n-4A0A075B615 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Trav4n-4A0A075B615 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav4n-4A0A075B615 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav4n-4A0A075B615 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC10.49□□□□□ -0.73
Trav4n-4A0A075B615 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Trav4n-4A0A075B615 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC10.49□□□□□ -0.73
Trav4n-4A0A075B615 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav4n-4A0A075B615 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC10.49□□□□□ -0.73
Trav4n-4A0A075B615 Gm43183-201ENSMUST00000200632 547 ntBASIC10.49□□□□□ -0.73
Trav4n-4A0A075B615 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC10.49□□□□□ -0.73
Trav4n-4A0A075B615 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav4n-4A0A075B615 AC127302.2-201ENSMUST00000215212 268 ntBASIC10.49□□□□□ -0.73
Trav4n-4A0A075B615 Gm7791-201ENSMUST00000219066 539 ntBASIC10.49□□□□□ -0.73
Trav4n-4A0A075B615 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav4n-4A0A075B615 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav4n-4A0A075B615 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC10.49□□□□□ -0.73
Trav4n-4A0A075B615 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Trav4n-4A0A075B615 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC10.49□□□□□ -0.73
Trav4n-4A0A075B615 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav4n-4A0A075B615 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Trav4n-4A0A075B615 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Trav4n-4A0A075B615 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Trav4n-4A0A075B615 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav4n-4A0A075B615 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Trav4n-4A0A075B615 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Trav4n-4A0A075B615 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav4n-4A0A075B615 Gm45779-201ENSMUST00000212189 4064 ntBASIC10.48□□□□□ -0.73
Trav4n-4A0A075B615 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Trav4n-4A0A075B615 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav4n-4A0A075B615 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav4n-4A0A075B615 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav4n-4A0A075B615 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav4n-4A0A075B615 Gm28182-201ENSMUST00000188354 2477 ntBASIC10.48□□□□□ -0.73
Trav4n-4A0A075B615 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Trav4n-4A0A075B615 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav4n-4A0A075B615 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav4n-4A0A075B615 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav4n-4A0A075B615 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Trav4n-4A0A075B615 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC10.48□□□□□ -0.73
Trav4n-4A0A075B615 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Trav4n-4A0A075B615 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav4n-4A0A075B615 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC10.48□□□□□ -0.73
Trav4n-4A0A075B615 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav4n-4A0A075B615 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav4n-4A0A075B615 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Trav4n-4A0A075B615 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC10.48□□□□□ -0.73
Trav4n-4A0A075B615 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav4n-4A0A075B615 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC10.48□□□□□ -0.73
Trav4n-4A0A075B615 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav4n-4A0A075B615 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Trav4n-4A0A075B615 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav4n-4A0A075B615 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav4n-4A0A075B615 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Trav4n-4A0A075B615 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav4n-4A0A075B615 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms