Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Smarcb1Q9Z0H3 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smarcb1Q9Z0H3 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Smarcb1Q9Z0H3 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smarcb1Q9Z0H3 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smarcb1Q9Z0H3 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Smarcb1Q9Z0H3 App-207ENSMUST00000227737 2827 ntBASIC15.67■□□□□ 0.1
Smarcb1Q9Z0H3 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smarcb1Q9Z0H3 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC15.67■□□□□ 0.1
Smarcb1Q9Z0H3 AC164567.1-201ENSMUST00000219185 960 ntBASIC15.67■□□□□ 0.1
Smarcb1Q9Z0H3 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smarcb1Q9Z0H3 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smarcb1Q9Z0H3 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Smarcb1Q9Z0H3 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Smarcb1Q9Z0H3 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smarcb1Q9Z0H3 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smarcb1Q9Z0H3 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Smarcb1Q9Z0H3 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC15.67■□□□□ 0.1
Smarcb1Q9Z0H3 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC15.67■□□□□ 0.1
Smarcb1Q9Z0H3 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smarcb1Q9Z0H3 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Smarcb1Q9Z0H3 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smarcb1Q9Z0H3 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smarcb1Q9Z0H3 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Smarcb1Q9Z0H3 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smarcb1Q9Z0H3 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smarcb1Q9Z0H3 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smarcb1Q9Z0H3 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Smarcb1Q9Z0H3 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Smarcb1Q9Z0H3 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Smarcb1Q9Z0H3 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC15.66■□□□□ 0.1
Smarcb1Q9Z0H3 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC15.66■□□□□ 0.1
Smarcb1Q9Z0H3 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Smarcb1Q9Z0H3 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC15.66■□□□□ 0.1
Smarcb1Q9Z0H3 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC15.66■□□□□ 0.1
Smarcb1Q9Z0H3 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC15.66■□□□□ 0.1
Smarcb1Q9Z0H3 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smarcb1Q9Z0H3 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC15.66■□□□□ 0.1
Smarcb1Q9Z0H3 Gm8242-201ENSMUST00000193029 1420 ntBASIC15.66■□□□□ 0.1
Smarcb1Q9Z0H3 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smarcb1Q9Z0H3 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smarcb1Q9Z0H3 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smarcb1Q9Z0H3 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smarcb1Q9Z0H3 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smarcb1Q9Z0H3 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC15.66■□□□□ 0.1
Smarcb1Q9Z0H3 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smarcb1Q9Z0H3 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC15.66■□□□□ 0.1
Smarcb1Q9Z0H3 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
Smarcb1Q9Z0H3 Gm9867-201ENSMUST00000192212 2647 ntBASIC15.65■□□□□ 0.1
Smarcb1Q9Z0H3 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Smarcb1Q9Z0H3 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Smarcb1Q9Z0H3 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smarcb1Q9Z0H3 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smarcb1Q9Z0H3 AC069562.2-201ENSMUST00000224644 2146 ntBASIC15.65■□□□□ 0.1
Smarcb1Q9Z0H3 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smarcb1Q9Z0H3 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smarcb1Q9Z0H3 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC15.65■□□□□ 0.1
Smarcb1Q9Z0H3 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smarcb1Q9Z0H3 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smarcb1Q9Z0H3 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Smarcb1Q9Z0H3 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smarcb1Q9Z0H3 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC15.65■□□□□ 0.1
Smarcb1Q9Z0H3 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smarcb1Q9Z0H3 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Smarcb1Q9Z0H3 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Smarcb1Q9Z0H3 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Smarcb1Q9Z0H3 Gm2810-201ENSMUST00000118681 990 ntBASIC15.65■□□□□ 0.1
Smarcb1Q9Z0H3 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Smarcb1Q9Z0H3 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
Smarcb1Q9Z0H3 Gm8597-201ENSMUST00000191525 1109 ntBASIC15.65■□□□□ 0.1
Smarcb1Q9Z0H3 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smarcb1Q9Z0H3 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smarcb1Q9Z0H3 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC15.65■□□□□ 0.1
Smarcb1Q9Z0H3 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smarcb1Q9Z0H3 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smarcb1Q9Z0H3 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smarcb1Q9Z0H3 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Smarcb1Q9Z0H3 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC15.65■□□□□ 0.1
Smarcb1Q9Z0H3 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smarcb1Q9Z0H3 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smarcb1Q9Z0H3 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC15.65■□□□□ 0.1
Smarcb1Q9Z0H3 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smarcb1Q9Z0H3 AC131743.5-201ENSMUST00000220775 1618 ntBASIC15.65■□□□□ 0.1
Smarcb1Q9Z0H3 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smarcb1Q9Z0H3 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Smarcb1Q9Z0H3 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Smarcb1Q9Z0H3 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Smarcb1Q9Z0H3 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Smarcb1Q9Z0H3 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Smarcb1Q9Z0H3 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Smarcb1Q9Z0H3 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Smarcb1Q9Z0H3 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Smarcb1Q9Z0H3 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Smarcb1Q9Z0H3 Gm13616-201ENSMUST00000120600 222 ntBASIC15.64■□□□□ 0.09
Smarcb1Q9Z0H3 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Smarcb1Q9Z0H3 Gm24158-201ENSMUST00000175263 71 ntBASIC15.64■□□□□ 0.09
Smarcb1Q9Z0H3 Gm10253-201ENSMUST00000194270 940 ntBASIC15.64■□□□□ 0.09
Smarcb1Q9Z0H3 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Smarcb1Q9Z0H3 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC15.64■□□□□ 0.09
Smarcb1Q9Z0H3 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC15.64■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms