Protein–RNA interactions for Protein: Q9Z0G9

Cldn3, Claudin-3, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn3Q9Z0G9 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Cldn3Q9Z0G9 Gm45293-201ENSMUST00000209754 1812 ntBASIC15.33■□□□□ 0.05
Cldn3Q9Z0G9 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Cldn3Q9Z0G9 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
Cldn3Q9Z0G9 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Cldn3Q9Z0G9 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Cldn3Q9Z0G9 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Cldn3Q9Z0G9 Gm11839-201ENSMUST00000120647 1953 ntBASIC15.33■□□□□ 0.05
Cldn3Q9Z0G9 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cldn3Q9Z0G9 Tfap2a-203ENSMUST00000223869 2037 ntBASIC15.33■□□□□ 0.04
Cldn3Q9Z0G9 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Cldn3Q9Z0G9 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cldn3Q9Z0G9 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cldn3Q9Z0G9 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Cldn3Q9Z0G9 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC15.33■□□□□ 0.04
Cldn3Q9Z0G9 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cldn3Q9Z0G9 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cldn3Q9Z0G9 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cldn3Q9Z0G9 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC15.33■□□□□ 0.04
Cldn3Q9Z0G9 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Cldn3Q9Z0G9 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC15.33■□□□□ 0.04
Cldn3Q9Z0G9 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Cldn3Q9Z0G9 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC15.33■□□□□ 0.04
Cldn3Q9Z0G9 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cldn3Q9Z0G9 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Cldn3Q9Z0G9 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Cldn3Q9Z0G9 AC147366.1-201ENSMUST00000227671 852 ntBASIC15.33■□□□□ 0.04
Cldn3Q9Z0G9 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Cldn3Q9Z0G9 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cldn3Q9Z0G9 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cldn3Q9Z0G9 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cldn3Q9Z0G9 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Cldn3Q9Z0G9 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cldn3Q9Z0G9 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cldn3Q9Z0G9 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cldn3Q9Z0G9 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Cldn3Q9Z0G9 Gm5049-201ENSMUST00000195878 1590 ntBASIC15.32■□□□□ 0.04
Cldn3Q9Z0G9 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC15.32■□□□□ 0.04
Cldn3Q9Z0G9 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cldn3Q9Z0G9 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cldn3Q9Z0G9 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cldn3Q9Z0G9 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cldn3Q9Z0G9 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC15.32■□□□□ 0.04
Cldn3Q9Z0G9 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Cldn3Q9Z0G9 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cldn3Q9Z0G9 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Cldn3Q9Z0G9 BC037039-201ENSMUST00000192003 2205 ntBASIC15.32■□□□□ 0.04
Cldn3Q9Z0G9 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cldn3Q9Z0G9 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cldn3Q9Z0G9 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cldn3Q9Z0G9 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cldn3Q9Z0G9 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Cldn3Q9Z0G9 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Cldn3Q9Z0G9 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC15.32■□□□□ 0.04
Cldn3Q9Z0G9 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Cldn3Q9Z0G9 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cldn3Q9Z0G9 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Cldn3Q9Z0G9 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC15.32■□□□□ 0.04
Cldn3Q9Z0G9 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cldn3Q9Z0G9 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cldn3Q9Z0G9 Best4-ps-201ENSMUST00000129783 1380 ntBASIC15.32■□□□□ 0.04
Cldn3Q9Z0G9 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Cldn3Q9Z0G9 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cldn3Q9Z0G9 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
Cldn3Q9Z0G9 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cldn3Q9Z0G9 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC15.32■□□□□ 0.04
Cldn3Q9Z0G9 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
Cldn3Q9Z0G9 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cldn3Q9Z0G9 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Cldn3Q9Z0G9 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Cldn3Q9Z0G9 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cldn3Q9Z0G9 Gm5184-201ENSMUST00000220417 1702 ntBASIC15.31■□□□□ 0.04
Cldn3Q9Z0G9 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cldn3Q9Z0G9 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cldn3Q9Z0G9 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Cldn3Q9Z0G9 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC15.31■□□□□ 0.04
Cldn3Q9Z0G9 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cldn3Q9Z0G9 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cldn3Q9Z0G9 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC15.31■□□□□ 0.04
Cldn3Q9Z0G9 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cldn3Q9Z0G9 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC15.31■□□□□ 0.04
Cldn3Q9Z0G9 Gm27628-201ENSMUST00000184911 107 ntBASIC15.31■□□□□ 0.04
Cldn3Q9Z0G9 Gm42670-201ENSMUST00000201816 1292 ntBASIC15.31■□□□□ 0.04
Cldn3Q9Z0G9 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cldn3Q9Z0G9 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cldn3Q9Z0G9 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cldn3Q9Z0G9 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cldn3Q9Z0G9 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Cldn3Q9Z0G9 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Cldn3Q9Z0G9 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cldn3Q9Z0G9 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cldn3Q9Z0G9 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Cldn3Q9Z0G9 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC15.31■□□□□ 0.04
Cldn3Q9Z0G9 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Cldn3Q9Z0G9 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
Cldn3Q9Z0G9 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cldn3Q9Z0G9 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cldn3Q9Z0G9 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cldn3Q9Z0G9 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cldn3Q9Z0G9 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms