Protein–RNA interactions for Protein: Q9Z0D9

Cx3cr1, CX3C chemokine receptor 1, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cr1Q9Z0D9 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC12.83□□□□□ -0.35
Cx3cr1Q9Z0D9 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Cx3cr1Q9Z0D9 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Cx3cr1Q9Z0D9 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cx3cr1Q9Z0D9 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC12.83□□□□□ -0.36
Cx3cr1Q9Z0D9 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cx3cr1Q9Z0D9 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cx3cr1Q9Z0D9 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cx3cr1Q9Z0D9 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cx3cr1Q9Z0D9 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC12.83□□□□□ -0.36
Cx3cr1Q9Z0D9 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cx3cr1Q9Z0D9 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC12.83□□□□□ -0.36
Cx3cr1Q9Z0D9 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC12.83□□□□□ -0.36
Cx3cr1Q9Z0D9 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Cx3cr1Q9Z0D9 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cx3cr1Q9Z0D9 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cx3cr1Q9Z0D9 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Cx3cr1Q9Z0D9 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cx3cr1Q9Z0D9 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cx3cr1Q9Z0D9 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cx3cr1Q9Z0D9 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cx3cr1Q9Z0D9 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cx3cr1Q9Z0D9 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cx3cr1Q9Z0D9 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cx3cr1Q9Z0D9 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cx3cr1Q9Z0D9 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Cx3cr1Q9Z0D9 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Cx3cr1Q9Z0D9 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cx3cr1Q9Z0D9 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cx3cr1Q9Z0D9 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cx3cr1Q9Z0D9 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cx3cr1Q9Z0D9 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cx3cr1Q9Z0D9 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cx3cr1Q9Z0D9 Gm43697-201ENSMUST00000199637 2581 ntBASIC12.82□□□□□ -0.36
Cx3cr1Q9Z0D9 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cx3cr1Q9Z0D9 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cx3cr1Q9Z0D9 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC12.82□□□□□ -0.36
Cx3cr1Q9Z0D9 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cx3cr1Q9Z0D9 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cx3cr1Q9Z0D9 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC12.82□□□□□ -0.36
Cx3cr1Q9Z0D9 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cx3cr1Q9Z0D9 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cx3cr1Q9Z0D9 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Cx3cr1Q9Z0D9 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Cx3cr1Q9Z0D9 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC12.82□□□□□ -0.36
Cx3cr1Q9Z0D9 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cx3cr1Q9Z0D9 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cx3cr1Q9Z0D9 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Cx3cr1Q9Z0D9 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Cx3cr1Q9Z0D9 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC12.82□□□□□ -0.36
Cx3cr1Q9Z0D9 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cx3cr1Q9Z0D9 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cx3cr1Q9Z0D9 Gm6623-201ENSMUST00000173570 544 ntBASIC12.82□□□□□ -0.36
Cx3cr1Q9Z0D9 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cx3cr1Q9Z0D9 Gm43799-201ENSMUST00000201845 579 ntBASIC12.82□□□□□ -0.36
Cx3cr1Q9Z0D9 Gm19164-201ENSMUST00000210667 640 ntBASIC12.82□□□□□ -0.36
Cx3cr1Q9Z0D9 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cx3cr1Q9Z0D9 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Cx3cr1Q9Z0D9 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cx3cr1Q9Z0D9 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cx3cr1Q9Z0D9 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cx3cr1Q9Z0D9 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cx3cr1Q9Z0D9 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Cx3cr1Q9Z0D9 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC12.82□□□□□ -0.36
Cx3cr1Q9Z0D9 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Cx3cr1Q9Z0D9 Gm43509-201ENSMUST00000196551 2594 ntBASIC12.82□□□□□ -0.36
Cx3cr1Q9Z0D9 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cx3cr1Q9Z0D9 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cx3cr1Q9Z0D9 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC12.82□□□□□ -0.36
Cx3cr1Q9Z0D9 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Cx3cr1Q9Z0D9 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cx3cr1Q9Z0D9 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cx3cr1Q9Z0D9 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cx3cr1Q9Z0D9 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC12.82□□□□□ -0.36
Cx3cr1Q9Z0D9 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cx3cr1Q9Z0D9 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cx3cr1Q9Z0D9 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cx3cr1Q9Z0D9 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cx3cr1Q9Z0D9 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cx3cr1Q9Z0D9 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cx3cr1Q9Z0D9 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
Cx3cr1Q9Z0D9 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cx3cr1Q9Z0D9 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC12.81□□□□□ -0.36
Cx3cr1Q9Z0D9 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cx3cr1Q9Z0D9 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cx3cr1Q9Z0D9 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Cx3cr1Q9Z0D9 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cx3cr1Q9Z0D9 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cx3cr1Q9Z0D9 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC12.81□□□□□ -0.36
Cx3cr1Q9Z0D9 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cx3cr1Q9Z0D9 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cx3cr1Q9Z0D9 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cx3cr1Q9Z0D9 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Cx3cr1Q9Z0D9 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC12.81□□□□□ -0.36
Cx3cr1Q9Z0D9 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC12.81□□□□□ -0.36
Cx3cr1Q9Z0D9 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC12.81□□□□□ -0.36
Cx3cr1Q9Z0D9 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Cx3cr1Q9Z0D9 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cx3cr1Q9Z0D9 AC159093.1-201ENSMUST00000227779 380 ntBASIC12.81□□□□□ -0.36
Cx3cr1Q9Z0D9 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms