Protein–RNA interactions for Protein: Q9Y2Q9

MRPS28, 28S ribosomal protein S28, mitochondrial, humanhuman

Known RBP Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28Q9Y2Q9 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC15.57■□□□□ 0.08
MRPS28Q9Y2Q9 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
MRPS28Q9Y2Q9 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
MRPS28Q9Y2Q9 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
MRPS28Q9Y2Q9 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
MRPS28Q9Y2Q9 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
MRPS28Q9Y2Q9 KRT18P29-201ENST00000397031 1267 ntBASIC15.57■□□□□ 0.08
MRPS28Q9Y2Q9 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC15.57■□□□□ 0.08
MRPS28Q9Y2Q9 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC15.57■□□□□ 0.08
MRPS28Q9Y2Q9 AP001412.1-201ENST00000608405 714 ntBASIC15.57■□□□□ 0.08
MRPS28Q9Y2Q9 REXO1L10P-201ENST00000615707 1290 ntBASIC15.57■□□□□ 0.08
MRPS28Q9Y2Q9 REXO1L12P-201ENST00000622156 912 ntBASIC15.57■□□□□ 0.08
MRPS28Q9Y2Q9 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
MRPS28Q9Y2Q9 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
MRPS28Q9Y2Q9 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC15.57■□□□□ 0.08
MRPS28Q9Y2Q9 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
MRPS28Q9Y2Q9 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
MRPS28Q9Y2Q9 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
MRPS28Q9Y2Q9 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC15.57■□□□□ 0.08
MRPS28Q9Y2Q9 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
MRPS28Q9Y2Q9 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
MRPS28Q9Y2Q9 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC15.56■□□□□ 0.08
MRPS28Q9Y2Q9 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
MRPS28Q9Y2Q9 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC15.56■□□□□ 0.08
MRPS28Q9Y2Q9 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC15.56■□□□□ 0.08
MRPS28Q9Y2Q9 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC15.56■□□□□ 0.08
MRPS28Q9Y2Q9 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
MRPS28Q9Y2Q9 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
MRPS28Q9Y2Q9 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
MRPS28Q9Y2Q9 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
MRPS28Q9Y2Q9 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC15.56■□□□□ 0.08
MRPS28Q9Y2Q9 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC15.56■□□□□ 0.08
MRPS28Q9Y2Q9 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
MRPS28Q9Y2Q9 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
MRPS28Q9Y2Q9 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
MRPS28Q9Y2Q9 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
MRPS28Q9Y2Q9 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
MRPS28Q9Y2Q9 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
MRPS28Q9Y2Q9 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
MRPS28Q9Y2Q9 KIRREL3-AS3-201ENST00000404882 831 ntBASIC15.56■□□□□ 0.08
MRPS28Q9Y2Q9 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
MRPS28Q9Y2Q9 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC15.56■□□□□ 0.08
MRPS28Q9Y2Q9 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC15.56■□□□□ 0.08
MRPS28Q9Y2Q9 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC15.56■□□□□ 0.08
MRPS28Q9Y2Q9 ITM2C-210ENST00000620962 501 ntBASIC15.56■□□□□ 0.08
MRPS28Q9Y2Q9 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
MRPS28Q9Y2Q9 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
MRPS28Q9Y2Q9 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC15.56■□□□□ 0.08
MRPS28Q9Y2Q9 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC15.56■□□□□ 0.08
MRPS28Q9Y2Q9 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
MRPS28Q9Y2Q9 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
MRPS28Q9Y2Q9 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
MRPS28Q9Y2Q9 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC15.56■□□□□ 0.08
MRPS28Q9Y2Q9 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
MRPS28Q9Y2Q9 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC15.56■□□□□ 0.08
MRPS28Q9Y2Q9 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
MRPS28Q9Y2Q9 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
MRPS28Q9Y2Q9 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
MRPS28Q9Y2Q9 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
MRPS28Q9Y2Q9 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
MRPS28Q9Y2Q9 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
MRPS28Q9Y2Q9 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC15.55■□□□□ 0.08
MRPS28Q9Y2Q9 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC15.55■□□□□ 0.08
MRPS28Q9Y2Q9 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
MRPS28Q9Y2Q9 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC15.55■□□□□ 0.08
MRPS28Q9Y2Q9 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
MRPS28Q9Y2Q9 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
MRPS28Q9Y2Q9 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
MRPS28Q9Y2Q9 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
MRPS28Q9Y2Q9 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
MRPS28Q9Y2Q9 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
MRPS28Q9Y2Q9 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
MRPS28Q9Y2Q9 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC15.55■□□□□ 0.08
MRPS28Q9Y2Q9 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC15.55■□□□□ 0.08
MRPS28Q9Y2Q9 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC15.55■□□□□ 0.08
MRPS28Q9Y2Q9 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
MRPS28Q9Y2Q9 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
MRPS28Q9Y2Q9 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
MRPS28Q9Y2Q9 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC15.55■□□□□ 0.08
MRPS28Q9Y2Q9 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
MRPS28Q9Y2Q9 ABHD17AP1-201ENST00000358206 933 ntBASIC15.55■□□□□ 0.08
MRPS28Q9Y2Q9 PEX7-202ENST00000367756 680 ntTSL 3 BASIC15.55■□□□□ 0.08
MRPS28Q9Y2Q9 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC15.55■□□□□ 0.08
MRPS28Q9Y2Q9 RPS2P55-201ENST00000397318 883 ntBASIC15.55■□□□□ 0.08
MRPS28Q9Y2Q9 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC15.55■□□□□ 0.08
MRPS28Q9Y2Q9 AL355355.2-201ENST00000442321 338 ntBASIC15.55■□□□□ 0.08
MRPS28Q9Y2Q9 TSPY20P-201ENST00000450910 630 ntBASIC15.55■□□□□ 0.08
MRPS28Q9Y2Q9 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
MRPS28Q9Y2Q9 AC107956.1-201ENST00000494359 873 ntBASIC15.55■□□□□ 0.08
MRPS28Q9Y2Q9 AP003041.3-201ENST00000527151 707 ntBASIC15.55■□□□□ 0.08
MRPS28Q9Y2Q9 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC15.55■□□□□ 0.08
MRPS28Q9Y2Q9 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC15.55■□□□□ 0.08
MRPS28Q9Y2Q9 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC15.55■□□□□ 0.08
MRPS28Q9Y2Q9 CR769767.2-201ENST00000622735 460 ntBASIC15.55■□□□□ 0.08
MRPS28Q9Y2Q9 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC15.55■□□□□ 0.08
MRPS28Q9Y2Q9 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC15.55■□□□□ 0.08
MRPS28Q9Y2Q9 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
MRPS28Q9Y2Q9 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC15.55■□□□□ 0.08
MRPS28Q9Y2Q9 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
MRPS28Q9Y2Q9 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms