Protein–RNA interactions for Protein: Q9R1N9

Col13a1, Collagen alpha-1(XIII) chain, mousemouse

Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col13a1Q9R1N9 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Col13a1Q9R1N9 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Col13a1Q9R1N9 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col13a1Q9R1N9 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col13a1Q9R1N9 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Col13a1Q9R1N9 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
Col13a1Q9R1N9 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col13a1Q9R1N9 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col13a1Q9R1N9 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col13a1Q9R1N9 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col13a1Q9R1N9 Gm15358-201ENSMUST00000119249 520 ntBASIC12.9□□□□□ -0.34
Col13a1Q9R1N9 Gm8344-201ENSMUST00000119813 856 ntBASIC12.9□□□□□ -0.34
Col13a1Q9R1N9 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC12.9□□□□□ -0.34
Col13a1Q9R1N9 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC12.9□□□□□ -0.34
Col13a1Q9R1N9 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC12.9□□□□□ -0.34
Col13a1Q9R1N9 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col13a1Q9R1N9 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Col13a1Q9R1N9 Gtpbp10-211ENSMUST00000198799 648 ntBASIC12.9□□□□□ -0.34
Col13a1Q9R1N9 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col13a1Q9R1N9 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Col13a1Q9R1N9 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Col13a1Q9R1N9 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col13a1Q9R1N9 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col13a1Q9R1N9 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col13a1Q9R1N9 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col13a1Q9R1N9 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col13a1Q9R1N9 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col13a1Q9R1N9 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col13a1Q9R1N9 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col13a1Q9R1N9 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col13a1Q9R1N9 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Col13a1Q9R1N9 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Col13a1Q9R1N9 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col13a1Q9R1N9 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.35
Col13a1Q9R1N9 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.35
Col13a1Q9R1N9 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col13a1Q9R1N9 Gm5366-201ENSMUST00000215494 1338 ntBASIC12.89□□□□□ -0.35
Col13a1Q9R1N9 Gm6018-201ENSMUST00000216090 1306 ntBASIC12.89□□□□□ -0.35
Col13a1Q9R1N9 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Col13a1Q9R1N9 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Col13a1Q9R1N9 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col13a1Q9R1N9 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col13a1Q9R1N9 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Col13a1Q9R1N9 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col13a1Q9R1N9 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Col13a1Q9R1N9 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col13a1Q9R1N9 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Col13a1Q9R1N9 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Col13a1Q9R1N9 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Col13a1Q9R1N9 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Col13a1Q9R1N9 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Col13a1Q9R1N9 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col13a1Q9R1N9 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col13a1Q9R1N9 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Col13a1Q9R1N9 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col13a1Q9R1N9 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col13a1Q9R1N9 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Col13a1Q9R1N9 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col13a1Q9R1N9 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col13a1Q9R1N9 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC12.89□□□□□ -0.35
Col13a1Q9R1N9 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Col13a1Q9R1N9 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC12.89□□□□□ -0.35
Col13a1Q9R1N9 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col13a1Q9R1N9 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col13a1Q9R1N9 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col13a1Q9R1N9 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC12.88□□□□□ -0.35
Col13a1Q9R1N9 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Col13a1Q9R1N9 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Col13a1Q9R1N9 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col13a1Q9R1N9 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col13a1Q9R1N9 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col13a1Q9R1N9 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Col13a1Q9R1N9 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Col13a1Q9R1N9 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col13a1Q9R1N9 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Col13a1Q9R1N9 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col13a1Q9R1N9 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC12.88□□□□□ -0.35
Col13a1Q9R1N9 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Col13a1Q9R1N9 Gm24158-201ENSMUST00000175263 71 ntBASIC12.88□□□□□ -0.35
Col13a1Q9R1N9 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Col13a1Q9R1N9 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC12.88□□□□□ -0.35
Col13a1Q9R1N9 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col13a1Q9R1N9 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col13a1Q9R1N9 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col13a1Q9R1N9 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC12.88□□□□□ -0.35
Col13a1Q9R1N9 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Col13a1Q9R1N9 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col13a1Q9R1N9 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC12.88□□□□□ -0.35
Col13a1Q9R1N9 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col13a1Q9R1N9 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col13a1Q9R1N9 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
Col13a1Q9R1N9 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col13a1Q9R1N9 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col13a1Q9R1N9 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col13a1Q9R1N9 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Col13a1Q9R1N9 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Col13a1Q9R1N9 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col13a1Q9R1N9 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Col13a1Q9R1N9 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col13a1Q9R1N9 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC12.88□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 56.6 ms