Protein–RNA interactions for Protein: Q9R0A1

Clcn2, Chloride channel protein 2, mousemouse

Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn2Q9R0A1 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Clcn2Q9R0A1 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Clcn2Q9R0A1 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Clcn2Q9R0A1 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Clcn2Q9R0A1 Gm43697-201ENSMUST00000199637 2581 ntBASIC15.49■□□□□ 0.07
Clcn2Q9R0A1 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Clcn2Q9R0A1 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Clcn2Q9R0A1 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Clcn2Q9R0A1 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Clcn2Q9R0A1 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Clcn2Q9R0A1 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Clcn2Q9R0A1 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Clcn2Q9R0A1 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Clcn2Q9R0A1 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Clcn2Q9R0A1 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Clcn2Q9R0A1 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Clcn2Q9R0A1 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC15.48■□□□□ 0.07
Clcn2Q9R0A1 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Clcn2Q9R0A1 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Clcn2Q9R0A1 Gm7862-201ENSMUST00000121461 292 ntBASIC15.48■□□□□ 0.07
Clcn2Q9R0A1 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
Clcn2Q9R0A1 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC15.48■□□□□ 0.07
Clcn2Q9R0A1 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Clcn2Q9R0A1 Gm7461-201ENSMUST00000058918 827 ntBASIC15.48■□□□□ 0.07
Clcn2Q9R0A1 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Clcn2Q9R0A1 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Clcn2Q9R0A1 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Clcn2Q9R0A1 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Clcn2Q9R0A1 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Clcn2Q9R0A1 Gm14780-201ENSMUST00000118387 2737 ntBASIC15.48■□□□□ 0.07
Clcn2Q9R0A1 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Clcn2Q9R0A1 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Clcn2Q9R0A1 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Clcn2Q9R0A1 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Clcn2Q9R0A1 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Clcn2Q9R0A1 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Clcn2Q9R0A1 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Clcn2Q9R0A1 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC15.47■□□□□ 0.07
Clcn2Q9R0A1 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Clcn2Q9R0A1 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Clcn2Q9R0A1 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Clcn2Q9R0A1 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC15.47■□□□□ 0.07
Clcn2Q9R0A1 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Clcn2Q9R0A1 Gm11452-201ENSMUST00000122376 690 ntBASIC15.47■□□□□ 0.07
Clcn2Q9R0A1 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Clcn2Q9R0A1 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC15.47■□□□□ 0.07
Clcn2Q9R0A1 AC133598.3-202ENSMUST00000224219 531 ntBASIC15.47■□□□□ 0.07
Clcn2Q9R0A1 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Clcn2Q9R0A1 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Clcn2Q9R0A1 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Clcn2Q9R0A1 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Clcn2Q9R0A1 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC15.47■□□□□ 0.07
Clcn2Q9R0A1 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Clcn2Q9R0A1 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Clcn2Q9R0A1 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Clcn2Q9R0A1 Sorbs3-204ENSMUST00000227929 2460 ntBASIC15.46■□□□□ 0.07
Clcn2Q9R0A1 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Clcn2Q9R0A1 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Clcn2Q9R0A1 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Clcn2Q9R0A1 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Clcn2Q9R0A1 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Clcn2Q9R0A1 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Clcn2Q9R0A1 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Clcn2Q9R0A1 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Clcn2Q9R0A1 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Clcn2Q9R0A1 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Clcn2Q9R0A1 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC15.46■□□□□ 0.07
Clcn2Q9R0A1 Gm11780-201ENSMUST00000136880 516 ntBASIC15.46■□□□□ 0.07
Clcn2Q9R0A1 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC15.46■□□□□ 0.07
Clcn2Q9R0A1 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC15.46■□□□□ 0.07
Clcn2Q9R0A1 Gm6376-201ENSMUST00000209407 580 ntBASIC15.46■□□□□ 0.07
Clcn2Q9R0A1 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC15.46■□□□□ 0.07
Clcn2Q9R0A1 Gm8655-201ENSMUST00000221159 852 ntBASIC15.46■□□□□ 0.07
Clcn2Q9R0A1 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Clcn2Q9R0A1 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Clcn2Q9R0A1 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Clcn2Q9R0A1 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Clcn2Q9R0A1 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Clcn2Q9R0A1 Gm5837-201ENSMUST00000191844 1369 ntBASIC15.46■□□□□ 0.07
Clcn2Q9R0A1 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.06
Clcn2Q9R0A1 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Clcn2Q9R0A1 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC15.45■□□□□ 0.06
Clcn2Q9R0A1 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Clcn2Q9R0A1 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Clcn2Q9R0A1 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC15.45■□□□□ 0.06
Clcn2Q9R0A1 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Clcn2Q9R0A1 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Clcn2Q9R0A1 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC15.45■□□□□ 0.06
Clcn2Q9R0A1 Gm8097-201ENSMUST00000117903 829 ntBASIC15.45■□□□□ 0.06
Clcn2Q9R0A1 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC15.45■□□□□ 0.06
Clcn2Q9R0A1 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Clcn2Q9R0A1 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Clcn2Q9R0A1 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Clcn2Q9R0A1 Gm37584-201ENSMUST00000193595 1290 ntBASIC15.45■□□□□ 0.06
Clcn2Q9R0A1 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC15.45■□□□□ 0.06
Clcn2Q9R0A1 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Clcn2Q9R0A1 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Clcn2Q9R0A1 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Clcn2Q9R0A1 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Clcn2Q9R0A1 Gm12620-201ENSMUST00000119791 1986 ntBASIC15.45■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms