Protein–RNA interactions for Protein: Q9R078

Prkab1, 5'-AMP-activated protein kinase subunit beta-1, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prkab1Q9R078 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Prkab1Q9R078 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Prkab1Q9R078 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC17.26■□□□□ 0.35
Prkab1Q9R078 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Prkab1Q9R078 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Prkab1Q9R078 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Prkab1Q9R078 Gm45412-201ENSMUST00000210217 2275 ntBASIC17.26■□□□□ 0.35
Prkab1Q9R078 AC131743.5-201ENSMUST00000220775 1618 ntBASIC17.26■□□□□ 0.35
Prkab1Q9R078 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Prkab1Q9R078 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC17.26■□□□□ 0.35
Prkab1Q9R078 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Prkab1Q9R078 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Prkab1Q9R078 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC17.26■□□□□ 0.35
Prkab1Q9R078 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC17.26■□□□□ 0.35
Prkab1Q9R078 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC17.26■□□□□ 0.35
Prkab1Q9R078 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Prkab1Q9R078 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC17.26■□□□□ 0.35
Prkab1Q9R078 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC17.26■□□□□ 0.35
Prkab1Q9R078 Gm8242-201ENSMUST00000193029 1420 ntBASIC17.26■□□□□ 0.35
Prkab1Q9R078 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Prkab1Q9R078 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Prkab1Q9R078 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Prkab1Q9R078 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC17.26■□□□□ 0.35
Prkab1Q9R078 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Prkab1Q9R078 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Prkab1Q9R078 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Prkab1Q9R078 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Prkab1Q9R078 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Prkab1Q9R078 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Prkab1Q9R078 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Prkab1Q9R078 Ccdc166-201ENSMUST00000182172 2584 ntBASIC17.25■□□□□ 0.35
Prkab1Q9R078 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC17.25■□□□□ 0.35
Prkab1Q9R078 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Prkab1Q9R078 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Prkab1Q9R078 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Prkab1Q9R078 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Prkab1Q9R078 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Prkab1Q9R078 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC17.25■□□□□ 0.35
Prkab1Q9R078 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Prkab1Q9R078 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Prkab1Q9R078 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Prkab1Q9R078 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Prkab1Q9R078 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC17.25■□□□□ 0.35
Prkab1Q9R078 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Prkab1Q9R078 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Prkab1Q9R078 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Prkab1Q9R078 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Prkab1Q9R078 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Prkab1Q9R078 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
Prkab1Q9R078 Celf4-206ENSMUST00000224553 1729 ntBASIC17.24■□□□□ 0.35
Prkab1Q9R078 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Prkab1Q9R078 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Prkab1Q9R078 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC17.24■□□□□ 0.35
Prkab1Q9R078 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC17.24■□□□□ 0.35
Prkab1Q9R078 Gm13233-201ENSMUST00000118760 1443 ntBASIC17.24■□□□□ 0.35
Prkab1Q9R078 Gm13244-201ENSMUST00000118855 1446 ntBASIC17.24■□□□□ 0.35
Prkab1Q9R078 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC17.24■□□□□ 0.35
Prkab1Q9R078 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Prkab1Q9R078 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Prkab1Q9R078 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC17.24■□□□□ 0.35
Prkab1Q9R078 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Prkab1Q9R078 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Prkab1Q9R078 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Prkab1Q9R078 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC17.24■□□□□ 0.35
Prkab1Q9R078 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Prkab1Q9R078 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Prkab1Q9R078 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Prkab1Q9R078 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Prkab1Q9R078 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
Prkab1Q9R078 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Prkab1Q9R078 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Prkab1Q9R078 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC17.24■□□□□ 0.35
Prkab1Q9R078 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Prkab1Q9R078 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Prkab1Q9R078 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Prkab1Q9R078 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC17.24■□□□□ 0.35
Prkab1Q9R078 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Prkab1Q9R078 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Prkab1Q9R078 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC17.24■□□□□ 0.35
Prkab1Q9R078 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
Prkab1Q9R078 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
Prkab1Q9R078 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
Prkab1Q9R078 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Prkab1Q9R078 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Prkab1Q9R078 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Prkab1Q9R078 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Prkab1Q9R078 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Prkab1Q9R078 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
Prkab1Q9R078 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Prkab1Q9R078 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Prkab1Q9R078 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Prkab1Q9R078 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Prkab1Q9R078 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Prkab1Q9R078 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Prkab1Q9R078 Mir7023-201ENSMUST00000185093 64 ntBASIC17.23■□□□□ 0.35
Prkab1Q9R078 Gm38225-201ENSMUST00000194001 393 ntBASIC17.23■□□□□ 0.35
Prkab1Q9R078 Gm37277-201ENSMUST00000194052 1111 ntBASIC17.23■□□□□ 0.35
Prkab1Q9R078 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Prkab1Q9R078 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
Prkab1Q9R078 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms