Protein–RNA interactions for Protein: Q9JL35

Hmgn5, High mobility group nucleosome-binding domain-containing protein 5, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn5Q9JL35 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hmgn5Q9JL35 Gm44291-201ENSMUST00000203102 2865 ntBASIC17.05■□□□□ 0.32
Hmgn5Q9JL35 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hmgn5Q9JL35 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Hmgn5Q9JL35 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hmgn5Q9JL35 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hmgn5Q9JL35 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hmgn5Q9JL35 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Hmgn5Q9JL35 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hmgn5Q9JL35 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hmgn5Q9JL35 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hmgn5Q9JL35 Gm8242-201ENSMUST00000193029 1420 ntBASIC17.04■□□□□ 0.32
Hmgn5Q9JL35 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hmgn5Q9JL35 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hmgn5Q9JL35 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Hmgn5Q9JL35 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hmgn5Q9JL35 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Hmgn5Q9JL35 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Hmgn5Q9JL35 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hmgn5Q9JL35 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Hmgn5Q9JL35 Gm11860-201ENSMUST00000122346 1010 ntBASIC17.04■□□□□ 0.32
Hmgn5Q9JL35 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hmgn5Q9JL35 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hmgn5Q9JL35 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hmgn5Q9JL35 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC17.04■□□□□ 0.32
Hmgn5Q9JL35 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hmgn5Q9JL35 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hmgn5Q9JL35 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Hmgn5Q9JL35 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Hmgn5Q9JL35 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC17.04■□□□□ 0.32
Hmgn5Q9JL35 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hmgn5Q9JL35 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hmgn5Q9JL35 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hmgn5Q9JL35 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hmgn5Q9JL35 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Hmgn5Q9JL35 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Hmgn5Q9JL35 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Hmgn5Q9JL35 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Hmgn5Q9JL35 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Hmgn5Q9JL35 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC17.03■□□□□ 0.32
Hmgn5Q9JL35 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hmgn5Q9JL35 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Hmgn5Q9JL35 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC17.03■□□□□ 0.32
Hmgn5Q9JL35 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC17.03■□□□□ 0.32
Hmgn5Q9JL35 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Hmgn5Q9JL35 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hmgn5Q9JL35 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hmgn5Q9JL35 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Hmgn5Q9JL35 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hmgn5Q9JL35 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hmgn5Q9JL35 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hmgn5Q9JL35 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.32
Hmgn5Q9JL35 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hmgn5Q9JL35 Gm9856-201ENSMUST00000217077 2578 ntBASIC17.02■□□□□ 0.32
Hmgn5Q9JL35 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hmgn5Q9JL35 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hmgn5Q9JL35 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hmgn5Q9JL35 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Hmgn5Q9JL35 Gm4609-201ENSMUST00000106443 1002 ntBASIC17.02■□□□□ 0.32
Hmgn5Q9JL35 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Hmgn5Q9JL35 Gm5138-201ENSMUST00000113842 1002 ntBASIC17.02■□□□□ 0.32
Hmgn5Q9JL35 Gm15191-201ENSMUST00000117933 1000 ntBASIC17.02■□□□□ 0.32
Hmgn5Q9JL35 Gm12182-201ENSMUST00000118655 1008 ntBASIC17.02■□□□□ 0.32
Hmgn5Q9JL35 Gm13882-201ENSMUST00000120886 1002 ntBASIC17.02■□□□□ 0.32
Hmgn5Q9JL35 Gm12669-201ENSMUST00000122162 1009 ntBASIC17.02■□□□□ 0.32
Hmgn5Q9JL35 Gm10284-201ENSMUST00000145057 1005 ntBASIC17.02■□□□□ 0.32
Hmgn5Q9JL35 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC17.02■□□□□ 0.32
Hmgn5Q9JL35 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hmgn5Q9JL35 Gm10481-201ENSMUST00000179228 1002 ntBASIC17.02■□□□□ 0.32
Hmgn5Q9JL35 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC17.02■□□□□ 0.32
Hmgn5Q9JL35 Gm2574-201ENSMUST00000181051 1002 ntBASIC17.02■□□□□ 0.32
Hmgn5Q9JL35 Gm3200-201ENSMUST00000181493 1002 ntBASIC17.02■□□□□ 0.32
Hmgn5Q9JL35 Gm8825-201ENSMUST00000182565 998 ntBASIC17.02■□□□□ 0.32
Hmgn5Q9JL35 Gm4518-201ENSMUST00000182638 718 ntBASIC17.02■□□□□ 0.32
Hmgn5Q9JL35 Gm8330-201ENSMUST00000182754 1008 ntBASIC17.02■□□□□ 0.32
Hmgn5Q9JL35 Gm4575-201ENSMUST00000182991 1002 ntBASIC17.02■□□□□ 0.32
Hmgn5Q9JL35 Gm8709-201ENSMUST00000183230 1012 ntBASIC17.02■□□□□ 0.32
Hmgn5Q9JL35 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Hmgn5Q9JL35 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hmgn5Q9JL35 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hmgn5Q9JL35 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Hmgn5Q9JL35 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hmgn5Q9JL35 Gm10293-201ENSMUST00000076317 1002 ntBASIC17.02■□□□□ 0.32
Hmgn5Q9JL35 Gm6316-201ENSMUST00000082064 1020 ntBASIC17.02■□□□□ 0.32
Hmgn5Q9JL35 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hmgn5Q9JL35 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Hmgn5Q9JL35 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Hmgn5Q9JL35 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Hmgn5Q9JL35 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Hmgn5Q9JL35 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Hmgn5Q9JL35 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
Hmgn5Q9JL35 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Hmgn5Q9JL35 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Hmgn5Q9JL35 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hmgn5Q9JL35 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Hmgn5Q9JL35 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Hmgn5Q9JL35 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Hmgn5Q9JL35 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Hmgn5Q9JL35 Gm12008-201ENSMUST00000117791 755 ntBASIC17.01■□□□□ 0.31
Hmgn5Q9JL35 AC159093.1-201ENSMUST00000227779 380 ntBASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms