Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC15.47■□□□□ 0.07
Nkx2-4Q9EQM3 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Nkx2-4Q9EQM3 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Nkx2-4Q9EQM3 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Nkx2-4Q9EQM3 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC15.47■□□□□ 0.07
Nkx2-4Q9EQM3 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Nkx2-4Q9EQM3 Gm43630-201ENSMUST00000201550 776 ntBASIC15.47■□□□□ 0.07
Nkx2-4Q9EQM3 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC15.47■□□□□ 0.07
Nkx2-4Q9EQM3 Gm46209-201ENSMUST00000217912 553 ntBASIC15.47■□□□□ 0.07
Nkx2-4Q9EQM3 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Nkx2-4Q9EQM3 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Nkx2-4Q9EQM3 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Nkx2-4Q9EQM3 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC15.47■□□□□ 0.07
Nkx2-4Q9EQM3 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Nkx2-4Q9EQM3 Gm15823-201ENSMUST00000064305 670 ntBASIC15.47■□□□□ 0.07
Nkx2-4Q9EQM3 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Nkx2-4Q9EQM3 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Nkx2-4Q9EQM3 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
Nkx2-4Q9EQM3 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC15.47■□□□□ 0.07
Nkx2-4Q9EQM3 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Nkx2-4Q9EQM3 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Nkx2-4Q9EQM3 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Nkx2-4Q9EQM3 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Nkx2-4Q9EQM3 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Nkx2-4Q9EQM3 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Nkx2-4Q9EQM3 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Nkx2-4Q9EQM3 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Nkx2-4Q9EQM3 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC15.46■□□□□ 0.07
Nkx2-4Q9EQM3 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Nkx2-4Q9EQM3 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Nkx2-4Q9EQM3 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Nkx2-4Q9EQM3 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Nkx2-4Q9EQM3 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Nkx2-4Q9EQM3 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Nkx2-4Q9EQM3 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Nkx2-4Q9EQM3 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Nkx2-4Q9EQM3 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC15.46■□□□□ 0.07
Nkx2-4Q9EQM3 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Nkx2-4Q9EQM3 Gm45668-201ENSMUST00000211271 493 ntBASIC15.46■□□□□ 0.07
Nkx2-4Q9EQM3 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Nkx2-4Q9EQM3 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Nkx2-4Q9EQM3 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC15.46■□□□□ 0.07
Nkx2-4Q9EQM3 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Nkx2-4Q9EQM3 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Nkx2-4Q9EQM3 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Nkx2-4Q9EQM3 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Nkx2-4Q9EQM3 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC15.46■□□□□ 0.06
Nkx2-4Q9EQM3 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Nkx2-4Q9EQM3 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Nkx2-4Q9EQM3 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC15.45■□□□□ 0.06
Nkx2-4Q9EQM3 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Nkx2-4Q9EQM3 Gm8131-201ENSMUST00000213783 1570 ntBASIC15.45■□□□□ 0.06
Nkx2-4Q9EQM3 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Nkx2-4Q9EQM3 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Nkx2-4Q9EQM3 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Nkx2-4Q9EQM3 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Nkx2-4Q9EQM3 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Nkx2-4Q9EQM3 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Nkx2-4Q9EQM3 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Nkx2-4Q9EQM3 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC15.45■□□□□ 0.06
Nkx2-4Q9EQM3 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Nkx2-4Q9EQM3 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Nkx2-4Q9EQM3 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Nkx2-4Q9EQM3 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Nkx2-4Q9EQM3 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Nkx2-4Q9EQM3 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Nkx2-4Q9EQM3 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Nkx2-4Q9EQM3 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Nkx2-4Q9EQM3 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Nkx2-4Q9EQM3 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Nkx2-4Q9EQM3 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Nkx2-4Q9EQM3 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Nkx2-4Q9EQM3 Gm6756-201ENSMUST00000180647 1620 ntBASIC15.44■□□□□ 0.06
Nkx2-4Q9EQM3 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Nkx2-4Q9EQM3 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC15.44■□□□□ 0.06
Nkx2-4Q9EQM3 Gm22189-201ENSMUST00000103822 86 ntBASIC15.44■□□□□ 0.06
Nkx2-4Q9EQM3 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC15.44■□□□□ 0.06
Nkx2-4Q9EQM3 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
Nkx2-4Q9EQM3 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Nkx2-4Q9EQM3 Gm37917-201ENSMUST00000194711 392 ntBASIC15.44■□□□□ 0.06
Nkx2-4Q9EQM3 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Nkx2-4Q9EQM3 Gm43703-201ENSMUST00000200523 763 ntBASIC15.44■□□□□ 0.06
Nkx2-4Q9EQM3 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC15.44■□□□□ 0.06
Nkx2-4Q9EQM3 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Nkx2-4Q9EQM3 AC164565.1-201ENSMUST00000217520 1484 ntBASIC15.44■□□□□ 0.06
Nkx2-4Q9EQM3 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC15.44■□□□□ 0.06
Nkx2-4Q9EQM3 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Nkx2-4Q9EQM3 Gm44729-201ENSMUST00000206759 2052 ntBASIC15.44■□□□□ 0.06
Nkx2-4Q9EQM3 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Nkx2-4Q9EQM3 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Nkx2-4Q9EQM3 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Nkx2-4Q9EQM3 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Nkx2-4Q9EQM3 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Nkx2-4Q9EQM3 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Nkx2-4Q9EQM3 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Nkx2-4Q9EQM3 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Nkx2-4Q9EQM3 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC15.43■□□□□ 0.06
Nkx2-4Q9EQM3 Gm11918-201ENSMUST00000121660 179 ntBASIC15.43■□□□□ 0.06
Nkx2-4Q9EQM3 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Nkx2-4Q9EQM3 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms