Protein–RNA interactions for Protein: Q9EPU4

Cpsf1, Cleavage and polyadenylation specificity factor subunit 1, mousemouse

Known RBP Predictions only

Length 1,441 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf1Q9EPU4 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC20.72■□□□□ 0.91
Cpsf1Q9EPU4 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cpsf1Q9EPU4 Gm42466-201ENSMUST00000202099 1301 ntBASIC20.72■□□□□ 0.91
Cpsf1Q9EPU4 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cpsf1Q9EPU4 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cpsf1Q9EPU4 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC20.71■□□□□ 0.91
Cpsf1Q9EPU4 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC20.71■□□□□ 0.91
Cpsf1Q9EPU4 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC20.71■□□□□ 0.91
Cpsf1Q9EPU4 Gm38225-201ENSMUST00000194001 393 ntBASIC20.71■□□□□ 0.91
Cpsf1Q9EPU4 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC20.71■□□□□ 0.91
Cpsf1Q9EPU4 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cpsf1Q9EPU4 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cpsf1Q9EPU4 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cpsf1Q9EPU4 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC20.71■□□□□ 0.91
Cpsf1Q9EPU4 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Cpsf1Q9EPU4 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Cpsf1Q9EPU4 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Cpsf1Q9EPU4 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cpsf1Q9EPU4 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC20.71■□□□□ 0.91
Cpsf1Q9EPU4 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cpsf1Q9EPU4 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cpsf1Q9EPU4 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cpsf1Q9EPU4 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC20.7■□□□□ 0.9
Cpsf1Q9EPU4 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Cpsf1Q9EPU4 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Cpsf1Q9EPU4 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cpsf1Q9EPU4 Gm27321-201ENSMUST00000185021 205 ntBASIC20.7■□□□□ 0.9
Cpsf1Q9EPU4 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Cpsf1Q9EPU4 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Cpsf1Q9EPU4 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Cpsf1Q9EPU4 Gm45098-201ENSMUST00000207179 657 ntBASIC20.7■□□□□ 0.9
Cpsf1Q9EPU4 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC20.7■□□□□ 0.9
Cpsf1Q9EPU4 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cpsf1Q9EPU4 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC20.7■□□□□ 0.9
Cpsf1Q9EPU4 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cpsf1Q9EPU4 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cpsf1Q9EPU4 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC20.7■□□□□ 0.9
Cpsf1Q9EPU4 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cpsf1Q9EPU4 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC20.7■□□□□ 0.9
Cpsf1Q9EPU4 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cpsf1Q9EPU4 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cpsf1Q9EPU4 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cpsf1Q9EPU4 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cpsf1Q9EPU4 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cpsf1Q9EPU4 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Cpsf1Q9EPU4 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
Cpsf1Q9EPU4 Gm37277-201ENSMUST00000194052 1111 ntBASIC20.7■□□□□ 0.9
Cpsf1Q9EPU4 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC20.7■□□□□ 0.9
Cpsf1Q9EPU4 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cpsf1Q9EPU4 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC20.69■□□□□ 0.9
Cpsf1Q9EPU4 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cpsf1Q9EPU4 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cpsf1Q9EPU4 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Cpsf1Q9EPU4 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Cpsf1Q9EPU4 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cpsf1Q9EPU4 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Cpsf1Q9EPU4 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC20.69■□□□□ 0.9
Cpsf1Q9EPU4 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cpsf1Q9EPU4 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC20.69■□□□□ 0.9
Cpsf1Q9EPU4 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cpsf1Q9EPU4 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cpsf1Q9EPU4 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cpsf1Q9EPU4 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Cpsf1Q9EPU4 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cpsf1Q9EPU4 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cpsf1Q9EPU4 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC20.69■□□□□ 0.9
Cpsf1Q9EPU4 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
Cpsf1Q9EPU4 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC20.69■□□□□ 0.9
Cpsf1Q9EPU4 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Cpsf1Q9EPU4 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Cpsf1Q9EPU4 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Cpsf1Q9EPU4 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cpsf1Q9EPU4 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cpsf1Q9EPU4 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cpsf1Q9EPU4 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Cpsf1Q9EPU4 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cpsf1Q9EPU4 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Cpsf1Q9EPU4 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Cpsf1Q9EPU4 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC20.68■□□□□ 0.9
Cpsf1Q9EPU4 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Cpsf1Q9EPU4 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Cpsf1Q9EPU4 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cpsf1Q9EPU4 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC20.68■□□□□ 0.9
Cpsf1Q9EPU4 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cpsf1Q9EPU4 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Cpsf1Q9EPU4 Gm27618-201ENSMUST00000183671 60 ntBASIC20.68■□□□□ 0.9
Cpsf1Q9EPU4 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC20.68■□□□□ 0.9
Cpsf1Q9EPU4 AC158529.1-201ENSMUST00000223618 239 ntBASIC20.68■□□□□ 0.9
Cpsf1Q9EPU4 Rbfox2-208ENSMUST00000227930 1218 ntBASIC20.68■□□□□ 0.9
Cpsf1Q9EPU4 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cpsf1Q9EPU4 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cpsf1Q9EPU4 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Cpsf1Q9EPU4 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cpsf1Q9EPU4 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Cpsf1Q9EPU4 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC20.68■□□□□ 0.9
Cpsf1Q9EPU4 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cpsf1Q9EPU4 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cpsf1Q9EPU4 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cpsf1Q9EPU4 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cpsf1Q9EPU4 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms