Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Hmgn3Q9DCB1 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hmgn3Q9DCB1 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Hmgn3Q9DCB1 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hmgn3Q9DCB1 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hmgn3Q9DCB1 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Hmgn3Q9DCB1 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hmgn3Q9DCB1 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hmgn3Q9DCB1 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC14.24□□□□□ -0.13
Hmgn3Q9DCB1 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hmgn3Q9DCB1 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hmgn3Q9DCB1 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Hmgn3Q9DCB1 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hmgn3Q9DCB1 Gm7556-201ENSMUST00000201178 1084 ntBASIC14.24□□□□□ -0.13
Hmgn3Q9DCB1 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Hmgn3Q9DCB1 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hmgn3Q9DCB1 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Hmgn3Q9DCB1 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Hmgn3Q9DCB1 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC14.24□□□□□ -0.13
Hmgn3Q9DCB1 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hmgn3Q9DCB1 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hmgn3Q9DCB1 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hmgn3Q9DCB1 AC166491.1-201ENSMUST00000227053 2308 ntBASIC14.24□□□□□ -0.13
Hmgn3Q9DCB1 Carlr-201ENSMUST00000181515 2574 ntBASIC14.24□□□□□ -0.13
Hmgn3Q9DCB1 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Hmgn3Q9DCB1 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hmgn3Q9DCB1 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hmgn3Q9DCB1 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Hmgn3Q9DCB1 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Hmgn3Q9DCB1 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC14.23□□□□□ -0.13
Hmgn3Q9DCB1 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Hmgn3Q9DCB1 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Hmgn3Q9DCB1 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hmgn3Q9DCB1 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hmgn3Q9DCB1 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Hmgn3Q9DCB1 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hmgn3Q9DCB1 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hmgn3Q9DCB1 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC14.23□□□□□ -0.13
Hmgn3Q9DCB1 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC14.23□□□□□ -0.13
Hmgn3Q9DCB1 Gm16061-201ENSMUST00000122167 857 ntBASIC14.23□□□□□ -0.13
Hmgn3Q9DCB1 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC14.23□□□□□ -0.13
Hmgn3Q9DCB1 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Hmgn3Q9DCB1 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Hmgn3Q9DCB1 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC14.23□□□□□ -0.13
Hmgn3Q9DCB1 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Hmgn3Q9DCB1 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC14.23□□□□□ -0.13
Hmgn3Q9DCB1 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC14.23□□□□□ -0.13
Hmgn3Q9DCB1 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hmgn3Q9DCB1 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hmgn3Q9DCB1 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hmgn3Q9DCB1 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hmgn3Q9DCB1 Gm26513-201ENSMUST00000181802 2489 ntBASIC14.23□□□□□ -0.13
Hmgn3Q9DCB1 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Hmgn3Q9DCB1 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hmgn3Q9DCB1 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hmgn3Q9DCB1 Gm44981-201ENSMUST00000205549 1943 ntBASIC14.23□□□□□ -0.13
Hmgn3Q9DCB1 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hmgn3Q9DCB1 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hmgn3Q9DCB1 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hmgn3Q9DCB1 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hmgn3Q9DCB1 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Hmgn3Q9DCB1 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Hmgn3Q9DCB1 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Hmgn3Q9DCB1 Gm38391-201ENSMUST00000191720 4069 ntBASIC14.22□□□□□ -0.13
Hmgn3Q9DCB1 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hmgn3Q9DCB1 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hmgn3Q9DCB1 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hmgn3Q9DCB1 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC14.22□□□□□ -0.13
Hmgn3Q9DCB1 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hmgn3Q9DCB1 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Hmgn3Q9DCB1 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hmgn3Q9DCB1 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hmgn3Q9DCB1 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Hmgn3Q9DCB1 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hmgn3Q9DCB1 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hmgn3Q9DCB1 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hmgn3Q9DCB1 Gm13474-201ENSMUST00000122466 815 ntBASIC14.22□□□□□ -0.13
Hmgn3Q9DCB1 Gm10052-201ENSMUST00000168019 960 ntBASIC14.22□□□□□ -0.13
Hmgn3Q9DCB1 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Hmgn3Q9DCB1 Gm2274-201ENSMUST00000184539 609 ntBASIC14.22□□□□□ -0.13
Hmgn3Q9DCB1 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC14.22□□□□□ -0.13
Hmgn3Q9DCB1 AL672049.1-201ENSMUST00000197943 91 ntBASIC14.22□□□□□ -0.13
Hmgn3Q9DCB1 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC14.22□□□□□ -0.13
Hmgn3Q9DCB1 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC14.22□□□□□ -0.13
Hmgn3Q9DCB1 CT009713.7-201ENSMUST00000224689 571 ntBASIC14.22□□□□□ -0.13
Hmgn3Q9DCB1 Gm7729-201ENSMUST00000050143 801 ntBASIC14.22□□□□□ -0.13
Hmgn3Q9DCB1 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hmgn3Q9DCB1 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hmgn3Q9DCB1 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hmgn3Q9DCB1 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hmgn3Q9DCB1 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC14.22□□□□□ -0.13
Hmgn3Q9DCB1 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hmgn3Q9DCB1 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hmgn3Q9DCB1 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Hmgn3Q9DCB1 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hmgn3Q9DCB1 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hmgn3Q9DCB1 Gm19863-201ENSMUST00000192480 2218 ntBASIC14.22□□□□□ -0.13
Hmgn3Q9DCB1 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hmgn3Q9DCB1 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hmgn3Q9DCB1 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms