Protein–RNA interactions for Protein: Q9D4V4

Taf1d, TATA box-binding protein-associated factor RNA polymerase I subunit D, mousemouse

Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Taf1dQ9D4V4 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Taf1dQ9D4V4 Gm7820-201ENSMUST00000121012 1052 ntBASIC17.96■□□□□ 0.47
Taf1dQ9D4V4 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
Taf1dQ9D4V4 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC17.96■□□□□ 0.47
Taf1dQ9D4V4 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
Taf1dQ9D4V4 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
Taf1dQ9D4V4 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC17.96■□□□□ 0.47
Taf1dQ9D4V4 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
Taf1dQ9D4V4 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC17.96■□□□□ 0.47
Taf1dQ9D4V4 Gm45453-201ENSMUST00000211758 853 ntBASIC17.96■□□□□ 0.47
Taf1dQ9D4V4 Gm9257-201ENSMUST00000221254 232 ntBASIC17.96■□□□□ 0.47
Taf1dQ9D4V4 Gm28265-201ENSMUST00000188201 2319 ntBASIC17.96■□□□□ 0.47
Taf1dQ9D4V4 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Taf1dQ9D4V4 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Taf1dQ9D4V4 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Taf1dQ9D4V4 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Taf1dQ9D4V4 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Taf1dQ9D4V4 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Taf1dQ9D4V4 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Taf1dQ9D4V4 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Taf1dQ9D4V4 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Taf1dQ9D4V4 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC17.96■□□□□ 0.46
Taf1dQ9D4V4 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Taf1dQ9D4V4 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Taf1dQ9D4V4 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Taf1dQ9D4V4 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Taf1dQ9D4V4 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC17.95■□□□□ 0.46
Taf1dQ9D4V4 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Taf1dQ9D4V4 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Taf1dQ9D4V4 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Taf1dQ9D4V4 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Taf1dQ9D4V4 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Taf1dQ9D4V4 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Taf1dQ9D4V4 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Taf1dQ9D4V4 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC17.95■□□□□ 0.46
Taf1dQ9D4V4 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC17.95■□□□□ 0.46
Taf1dQ9D4V4 Gm8835-201ENSMUST00000173096 1169 ntBASIC17.95■□□□□ 0.46
Taf1dQ9D4V4 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Taf1dQ9D4V4 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Taf1dQ9D4V4 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Taf1dQ9D4V4 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Taf1dQ9D4V4 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Taf1dQ9D4V4 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Taf1dQ9D4V4 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Taf1dQ9D4V4 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Taf1dQ9D4V4 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Taf1dQ9D4V4 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Taf1dQ9D4V4 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Taf1dQ9D4V4 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Taf1dQ9D4V4 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Taf1dQ9D4V4 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Taf1dQ9D4V4 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Taf1dQ9D4V4 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Taf1dQ9D4V4 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Taf1dQ9D4V4 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Taf1dQ9D4V4 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Taf1dQ9D4V4 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Taf1dQ9D4V4 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC17.94■□□□□ 0.46
Taf1dQ9D4V4 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC17.94■□□□□ 0.46
Taf1dQ9D4V4 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC17.94■□□□□ 0.46
Taf1dQ9D4V4 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Taf1dQ9D4V4 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Taf1dQ9D4V4 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Taf1dQ9D4V4 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Taf1dQ9D4V4 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Taf1dQ9D4V4 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Taf1dQ9D4V4 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC17.94■□□□□ 0.46
Taf1dQ9D4V4 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Taf1dQ9D4V4 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Taf1dQ9D4V4 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Taf1dQ9D4V4 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Taf1dQ9D4V4 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Taf1dQ9D4V4 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Taf1dQ9D4V4 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Taf1dQ9D4V4 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Taf1dQ9D4V4 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Taf1dQ9D4V4 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Taf1dQ9D4V4 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Taf1dQ9D4V4 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
Taf1dQ9D4V4 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC17.93■□□□□ 0.46
Taf1dQ9D4V4 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC17.93■□□□□ 0.46
Taf1dQ9D4V4 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Taf1dQ9D4V4 Gm44799-201ENSMUST00000207639 1202 ntBASIC17.93■□□□□ 0.46
Taf1dQ9D4V4 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC17.93■□□□□ 0.46
Taf1dQ9D4V4 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Taf1dQ9D4V4 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Taf1dQ9D4V4 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Taf1dQ9D4V4 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Taf1dQ9D4V4 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Taf1dQ9D4V4 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Taf1dQ9D4V4 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Taf1dQ9D4V4 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Taf1dQ9D4V4 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Taf1dQ9D4V4 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC17.92■□□□□ 0.46
Taf1dQ9D4V4 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
Taf1dQ9D4V4 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC17.92■□□□□ 0.46
Taf1dQ9D4V4 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Taf1dQ9D4V4 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Taf1dQ9D4V4 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Taf1dQ9D4V4 Gm8062-201ENSMUST00000139696 444 ntBASIC17.92■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms