Protein–RNA interactions for Protein: Q9CYI0

Protein Njmu-R1, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9CYI0 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Q9CYI0 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Q9CYI0 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Q9CYI0 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Q9CYI0 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Q9CYI0 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
Q9CYI0 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC16.7■□□□□ 0.26
Q9CYI0 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Q9CYI0 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC16.7■□□□□ 0.26
Q9CYI0 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Q9CYI0 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Q9CYI0 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Q9CYI0 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Q9CYI0 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Q9CYI0 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Q9CYI0 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Q9CYI0 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Q9CYI0 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Q9CYI0 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Q9CYI0 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC16.69■□□□□ 0.26
Q9CYI0 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Q9CYI0 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Q9CYI0 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Q9CYI0 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Q9CYI0 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Q9CYI0 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Q9CYI0 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Q9CYI0 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Q9CYI0 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Q9CYI0 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC16.69■□□□□ 0.26
Q9CYI0 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Q9CYI0 Gm12008-201ENSMUST00000117791 755 ntBASIC16.69■□□□□ 0.26
Q9CYI0 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC16.69■□□□□ 0.26
Q9CYI0 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Q9CYI0 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Q9CYI0 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Q9CYI0 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Q9CYI0 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Q9CYI0 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Q9CYI0 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC16.69■□□□□ 0.26
Q9CYI0 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Q9CYI0 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Q9CYI0 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC16.69■□□□□ 0.26
Q9CYI0 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC16.69■□□□□ 0.26
Q9CYI0 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Q9CYI0 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Q9CYI0 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Q9CYI0 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Q9CYI0 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
Q9CYI0 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Q9CYI0 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Q9CYI0 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC16.69■□□□□ 0.26
Q9CYI0 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Q9CYI0 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Q9CYI0 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Q9CYI0 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Q9CYI0 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Q9CYI0 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
Q9CYI0 Gm14701-201ENSMUST00000117156 348 ntBASIC16.68■□□□□ 0.26
Q9CYI0 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Q9CYI0 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC16.68■□□□□ 0.26
Q9CYI0 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
Q9CYI0 Gm2272-201ENSMUST00000194903 582 ntBASIC16.68■□□□□ 0.26
Q9CYI0 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC16.68■□□□□ 0.26
Q9CYI0 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Q9CYI0 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Q9CYI0 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Q9CYI0 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC16.68■□□□□ 0.26
Q9CYI0 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Q9CYI0 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Q9CYI0 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
Q9CYI0 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Q9CYI0 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Q9CYI0 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Q9CYI0 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Q9CYI0 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Q9CYI0 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Q9CYI0 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Q9CYI0 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Q9CYI0 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC16.67■□□□□ 0.26
Q9CYI0 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Q9CYI0 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Q9CYI0 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC16.67■□□□□ 0.26
Q9CYI0 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
Q9CYI0 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Q9CYI0 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Q9CYI0 AC155252.2-201ENSMUST00000226946 680 ntBASIC16.67■□□□□ 0.26
Q9CYI0 AC154412.1-201ENSMUST00000226540 2786 ntBASIC16.67■□□□□ 0.26
Q9CYI0 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Q9CYI0 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Q9CYI0 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Q9CYI0 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Q9CYI0 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Q9CYI0 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Q9CYI0 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC16.66■□□□□ 0.26
Q9CYI0 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Q9CYI0 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Q9CYI0 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Q9CYI0 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC16.66■□□□□ 0.26
Q9CYI0 Gm6226-201ENSMUST00000117765 1146 ntBASIC16.66■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms