Protein–RNA interactions for Protein: Q9CQS8

Sec61b, Protein transport protein Sec61 subunit beta, mousemouse

Known RBP Predictions only

Length 96 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61bQ9CQS8 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
Sec61bQ9CQS8 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Sec61bQ9CQS8 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Sec61bQ9CQS8 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC8.14□□□□□ -1.11
Sec61bQ9CQS8 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC8.14□□□□□ -1.11
Sec61bQ9CQS8 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC8.14□□□□□ -1.11
Sec61bQ9CQS8 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Sec61bQ9CQS8 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Sec61bQ9CQS8 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Sec61bQ9CQS8 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC8.14□□□□□ -1.11
Sec61bQ9CQS8 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC8.14□□□□□ -1.11
Sec61bQ9CQS8 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Sec61bQ9CQS8 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Sec61bQ9CQS8 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Sec61bQ9CQS8 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC8.14□□□□□ -1.11
Sec61bQ9CQS8 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC8.14□□□□□ -1.11
Sec61bQ9CQS8 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Sec61bQ9CQS8 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Sec61bQ9CQS8 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Sec61bQ9CQS8 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Sec61bQ9CQS8 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Sec61bQ9CQS8 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Sec61bQ9CQS8 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Sec61bQ9CQS8 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC8.14□□□□□ -1.11
Sec61bQ9CQS8 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Sec61bQ9CQS8 Mir6956-201ENSMUST00000183598 62 ntBASIC8.14□□□□□ -1.11
Sec61bQ9CQS8 Gm27430-201ENSMUST00000184585 107 ntBASIC8.14□□□□□ -1.11
Sec61bQ9CQS8 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC8.14□□□□□ -1.11
Sec61bQ9CQS8 Gm34816-201ENSMUST00000193363 502 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Sec61bQ9CQS8 Gm44333-201ENSMUST00000197168 107 ntBASIC8.14□□□□□ -1.11
Sec61bQ9CQS8 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Sec61bQ9CQS8 AC156801.1-201ENSMUST00000216158 493 ntTSL 5 BASIC8.14□□□□□ -1.11
Sec61bQ9CQS8 AC153361.2-203ENSMUST00000218083 661 ntTSL 3 BASIC8.14□□□□□ -1.11
Sec61bQ9CQS8 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Sec61bQ9CQS8 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC8.14□□□□□ -1.11
Sec61bQ9CQS8 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Sec61bQ9CQS8 Gemin6-201ENSMUST00000069486 1134 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Sec61bQ9CQS8 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
Sec61bQ9CQS8 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
Sec61bQ9CQS8 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
Sec61bQ9CQS8 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Sec61bQ9CQS8 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC8.14□□□□□ -1.11
Sec61bQ9CQS8 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Sec61bQ9CQS8 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
Sec61bQ9CQS8 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC8.14□□□□□ -1.11
Sec61bQ9CQS8 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC8.14□□□□□ -1.11
Sec61bQ9CQS8 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
Sec61bQ9CQS8 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Sec61bQ9CQS8 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Sec61bQ9CQS8 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC8.14□□□□□ -1.11
Sec61bQ9CQS8 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Sec61bQ9CQS8 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Sec61bQ9CQS8 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Sec61bQ9CQS8 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC8.14□□□□□ -1.11
Sec61bQ9CQS8 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Sec61bQ9CQS8 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Sec61bQ9CQS8 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
Sec61bQ9CQS8 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC8.14□□□□□ -1.11
Sec61bQ9CQS8 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Sec61bQ9CQS8 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Sec61bQ9CQS8 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Sec61bQ9CQS8 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
Sec61bQ9CQS8 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Sec61bQ9CQS8 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Sec61bQ9CQS8 Gm45606-201ENSMUST00000209836 2795 ntBASIC8.13□□□□□ -1.11
Sec61bQ9CQS8 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC8.13□□□□□ -1.11
Sec61bQ9CQS8 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Sec61bQ9CQS8 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Sec61bQ9CQS8 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Sec61bQ9CQS8 AC126250.1-201ENSMUST00000228343 1768 ntBASIC8.13□□□□□ -1.11
Sec61bQ9CQS8 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Sec61bQ9CQS8 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Sec61bQ9CQS8 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Sec61bQ9CQS8 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Sec61bQ9CQS8 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Sec61bQ9CQS8 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC8.13□□□□□ -1.11
Sec61bQ9CQS8 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Sec61bQ9CQS8 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC8.13□□□□□ -1.11
Sec61bQ9CQS8 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC8.13□□□□□ -1.11
Sec61bQ9CQS8 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Sec61bQ9CQS8 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
Sec61bQ9CQS8 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC8.13□□□□□ -1.11
Sec61bQ9CQS8 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Sec61bQ9CQS8 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Sec61bQ9CQS8 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC8.13□□□□□ -1.11
Sec61bQ9CQS8 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC8.13□□□□□ -1.11
Sec61bQ9CQS8 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Sec61bQ9CQS8 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Sec61bQ9CQS8 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Sec61bQ9CQS8 Gm18737-201ENSMUST00000173594 937 ntBASIC8.13□□□□□ -1.11
Sec61bQ9CQS8 Gm8318-201ENSMUST00000182954 872 ntBASIC8.13□□□□□ -1.11
Sec61bQ9CQS8 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
Sec61bQ9CQS8 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Sec61bQ9CQS8 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC8.13□□□□□ -1.11
Sec61bQ9CQS8 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Sec61bQ9CQS8 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC8.13□□□□□ -1.11
Sec61bQ9CQS8 AC158982.1-201ENSMUST00000228377 901 ntBASIC8.13□□□□□ -1.11
Sec61bQ9CQS8 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Sec61bQ9CQS8 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Sec61bQ9CQS8 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms