Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rnf111Q99ML9 Gm45546-201ENSMUST00000211053 2394 ntBASIC14.7□□□□□ -0.06
Rnf111Q99ML9 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rnf111Q99ML9 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rnf111Q99ML9 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rnf111Q99ML9 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Rnf111Q99ML9 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Rnf111Q99ML9 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Rnf111Q99ML9 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
Rnf111Q99ML9 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Rnf111Q99ML9 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC14.7□□□□□ -0.06
Rnf111Q99ML9 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rnf111Q99ML9 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC14.7□□□□□ -0.06
Rnf111Q99ML9 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Rnf111Q99ML9 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Rnf111Q99ML9 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC14.7□□□□□ -0.06
Rnf111Q99ML9 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rnf111Q99ML9 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rnf111Q99ML9 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rnf111Q99ML9 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rnf111Q99ML9 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rnf111Q99ML9 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Rnf111Q99ML9 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rnf111Q99ML9 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rnf111Q99ML9 AC159649.2-201ENSMUST00000222984 3223 ntBASIC14.7□□□□□ -0.06
Rnf111Q99ML9 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC14.7□□□□□ -0.06
Rnf111Q99ML9 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rnf111Q99ML9 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rnf111Q99ML9 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rnf111Q99ML9 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rnf111Q99ML9 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Rnf111Q99ML9 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rnf111Q99ML9 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rnf111Q99ML9 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rnf111Q99ML9 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rnf111Q99ML9 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rnf111Q99ML9 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Rnf111Q99ML9 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Rnf111Q99ML9 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Rnf111Q99ML9 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rnf111Q99ML9 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rnf111Q99ML9 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Rnf111Q99ML9 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Rnf111Q99ML9 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rnf111Q99ML9 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC14.69□□□□□ -0.06
Rnf111Q99ML9 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
Rnf111Q99ML9 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC14.69□□□□□ -0.06
Rnf111Q99ML9 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rnf111Q99ML9 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rnf111Q99ML9 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rnf111Q99ML9 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC14.69□□□□□ -0.06
Rnf111Q99ML9 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC14.69□□□□□ -0.06
Rnf111Q99ML9 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC14.69□□□□□ -0.06
Rnf111Q99ML9 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC14.69□□□□□ -0.06
Rnf111Q99ML9 AC160338.1-201ENSMUST00000214232 705 ntBASIC14.69□□□□□ -0.06
Rnf111Q99ML9 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Rnf111Q99ML9 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Rnf111Q99ML9 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Rnf111Q99ML9 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rnf111Q99ML9 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rnf111Q99ML9 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Rnf111Q99ML9 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC14.69□□□□□ -0.06
Rnf111Q99ML9 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Rnf111Q99ML9 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rnf111Q99ML9 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Rnf111Q99ML9 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC14.69□□□□□ -0.06
Rnf111Q99ML9 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rnf111Q99ML9 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Rnf111Q99ML9 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rnf111Q99ML9 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Rnf111Q99ML9 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rnf111Q99ML9 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Rnf111Q99ML9 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Rnf111Q99ML9 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rnf111Q99ML9 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rnf111Q99ML9 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
Rnf111Q99ML9 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rnf111Q99ML9 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rnf111Q99ML9 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Rnf111Q99ML9 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC14.68□□□□□ -0.06
Rnf111Q99ML9 Gm18622-201ENSMUST00000219361 595 ntBASIC14.68□□□□□ -0.06
Rnf111Q99ML9 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Rnf111Q99ML9 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rnf111Q99ML9 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rnf111Q99ML9 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rnf111Q99ML9 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rnf111Q99ML9 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rnf111Q99ML9 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rnf111Q99ML9 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rnf111Q99ML9 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rnf111Q99ML9 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rnf111Q99ML9 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rnf111Q99ML9 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC14.67□□□□□ -0.06
Rnf111Q99ML9 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Rnf111Q99ML9 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rnf111Q99ML9 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rnf111Q99ML9 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rnf111Q99ML9 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rnf111Q99ML9 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rnf111Q99ML9 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms