Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC14.17□□□□□ -0.14
Nkx6-1Q99MA9 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC14.17□□□□□ -0.14
Nkx6-1Q99MA9 Gm12490-201ENSMUST00000120255 560 ntBASIC14.17□□□□□ -0.14
Nkx6-1Q99MA9 Gm15483-201ENSMUST00000120338 456 ntBASIC14.17□□□□□ -0.14
Nkx6-1Q99MA9 Gm14767-201ENSMUST00000121559 586 ntBASIC14.17□□□□□ -0.14
Nkx6-1Q99MA9 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC14.17□□□□□ -0.14
Nkx6-1Q99MA9 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC14.17□□□□□ -0.14
Nkx6-1Q99MA9 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Nkx6-1Q99MA9 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Nkx6-1Q99MA9 Gm29541-201ENSMUST00000191351 678 ntBASIC14.17□□□□□ -0.14
Nkx6-1Q99MA9 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC14.17□□□□□ -0.14
Nkx6-1Q99MA9 Gm9063-201ENSMUST00000223299 582 ntBASIC14.17□□□□□ -0.14
Nkx6-1Q99MA9 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nkx6-1Q99MA9 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nkx6-1Q99MA9 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nkx6-1Q99MA9 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Nkx6-1Q99MA9 Gm15222-202ENSMUST00000228667 1726 ntBASIC14.17□□□□□ -0.14
Nkx6-1Q99MA9 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Nkx6-1Q99MA9 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nkx6-1Q99MA9 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nkx6-1Q99MA9 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nkx6-1Q99MA9 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Nkx6-1Q99MA9 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nkx6-1Q99MA9 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Nkx6-1Q99MA9 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nkx6-1Q99MA9 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nkx6-1Q99MA9 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nkx6-1Q99MA9 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nkx6-1Q99MA9 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nkx6-1Q99MA9 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nkx6-1Q99MA9 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nkx6-1Q99MA9 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nkx6-1Q99MA9 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nkx6-1Q99MA9 Gm42934-201ENSMUST00000196920 1345 ntBASIC14.16□□□□□ -0.14
Nkx6-1Q99MA9 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nkx6-1Q99MA9 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC14.16□□□□□ -0.14
Nkx6-1Q99MA9 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nkx6-1Q99MA9 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nkx6-1Q99MA9 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nkx6-1Q99MA9 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nkx6-1Q99MA9 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nkx6-1Q99MA9 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nkx6-1Q99MA9 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nkx6-1Q99MA9 Gm13015-201ENSMUST00000118674 204 ntBASIC14.16□□□□□ -0.14
Nkx6-1Q99MA9 Gm14722-201ENSMUST00000118943 689 ntBASIC14.16□□□□□ -0.14
Nkx6-1Q99MA9 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Nkx6-1Q99MA9 Gm28630-201ENSMUST00000187806 498 ntBASIC14.16□□□□□ -0.14
Nkx6-1Q99MA9 Gm6473-201ENSMUST00000188572 1210 ntBASIC14.16□□□□□ -0.14
Nkx6-1Q99MA9 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Nkx6-1Q99MA9 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nkx6-1Q99MA9 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nkx6-1Q99MA9 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nkx6-1Q99MA9 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Nkx6-1Q99MA9 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Nkx6-1Q99MA9 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nkx6-1Q99MA9 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nkx6-1Q99MA9 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Nkx6-1Q99MA9 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nkx6-1Q99MA9 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Nkx6-1Q99MA9 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC14.16□□□□□ -0.14
Nkx6-1Q99MA9 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC14.16□□□□□ -0.14
Nkx6-1Q99MA9 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nkx6-1Q99MA9 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nkx6-1Q99MA9 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Nkx6-1Q99MA9 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nkx6-1Q99MA9 Syt7-204ENSMUST00000223586 1344 ntBASIC14.15□□□□□ -0.14
Nkx6-1Q99MA9 AC115863.1-201ENSMUST00000214815 1813 ntBASIC14.15□□□□□ -0.14
Nkx6-1Q99MA9 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nkx6-1Q99MA9 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Nkx6-1Q99MA9 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nkx6-1Q99MA9 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Nkx6-1Q99MA9 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nkx6-1Q99MA9 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nkx6-1Q99MA9 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nkx6-1Q99MA9 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Nkx6-1Q99MA9 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Nkx6-1Q99MA9 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nkx6-1Q99MA9 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
Nkx6-1Q99MA9 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC14.15□□□□□ -0.14
Nkx6-1Q99MA9 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Nkx6-1Q99MA9 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Nkx6-1Q99MA9 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Nkx6-1Q99MA9 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Nkx6-1Q99MA9 Gm8116-201ENSMUST00000182917 1201 ntBASIC14.15□□□□□ -0.14
Nkx6-1Q99MA9 Gm43433-201ENSMUST00000196573 481 ntBASIC14.15□□□□□ -0.14
Nkx6-1Q99MA9 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Nkx6-1Q99MA9 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Nkx6-1Q99MA9 Cdk7-205ENSMUST00000225990 1159 ntBASIC14.15□□□□□ -0.14
Nkx6-1Q99MA9 AC132863.2-201ENSMUST00000226643 799 ntBASIC14.15□□□□□ -0.14
Nkx6-1Q99MA9 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Nkx6-1Q99MA9 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nkx6-1Q99MA9 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nkx6-1Q99MA9 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nkx6-1Q99MA9 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nkx6-1Q99MA9 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nkx6-1Q99MA9 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Nkx6-1Q99MA9 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Nkx6-1Q99MA9 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Nkx6-1Q99MA9 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Nkx6-1Q99MA9 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 115.6 ms