Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Chmp1b1Q99LU0 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Chmp1b1Q99LU0 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Chmp1b1Q99LU0 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chmp1b1Q99LU0 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chmp1b1Q99LU0 AC148324.1-201ENSMUST00000219034 4240 ntBASIC14.34□□□□□ -0.11
Chmp1b1Q99LU0 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Chmp1b1Q99LU0 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chmp1b1Q99LU0 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Chmp1b1Q99LU0 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chmp1b1Q99LU0 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chmp1b1Q99LU0 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chmp1b1Q99LU0 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Chmp1b1Q99LU0 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Chmp1b1Q99LU0 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Chmp1b1Q99LU0 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC14.33□□□□□ -0.11
Chmp1b1Q99LU0 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Chmp1b1Q99LU0 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chmp1b1Q99LU0 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
Chmp1b1Q99LU0 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chmp1b1Q99LU0 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chmp1b1Q99LU0 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chmp1b1Q99LU0 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Chmp1b1Q99LU0 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chmp1b1Q99LU0 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
Chmp1b1Q99LU0 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC14.33□□□□□ -0.12
Chmp1b1Q99LU0 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC14.33□□□□□ -0.12
Chmp1b1Q99LU0 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Chmp1b1Q99LU0 Gm7461-201ENSMUST00000058918 827 ntBASIC14.33□□□□□ -0.12
Chmp1b1Q99LU0 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chmp1b1Q99LU0 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chmp1b1Q99LU0 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chmp1b1Q99LU0 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chmp1b1Q99LU0 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Chmp1b1Q99LU0 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Chmp1b1Q99LU0 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC14.32□□□□□ -0.12
Chmp1b1Q99LU0 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC14.32□□□□□ -0.12
Chmp1b1Q99LU0 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Chmp1b1Q99LU0 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Chmp1b1Q99LU0 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Chmp1b1Q99LU0 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
Chmp1b1Q99LU0 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Chmp1b1Q99LU0 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Chmp1b1Q99LU0 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Chmp1b1Q99LU0 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC14.32□□□□□ -0.12
Chmp1b1Q99LU0 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Chmp1b1Q99LU0 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Chmp1b1Q99LU0 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Chmp1b1Q99LU0 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Chmp1b1Q99LU0 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Chmp1b1Q99LU0 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC14.32□□□□□ -0.12
Chmp1b1Q99LU0 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC14.32□□□□□ -0.12
Chmp1b1Q99LU0 Gm5864-201ENSMUST00000202263 970 ntBASIC14.32□□□□□ -0.12
Chmp1b1Q99LU0 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Chmp1b1Q99LU0 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC14.32□□□□□ -0.12
Chmp1b1Q99LU0 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Chmp1b1Q99LU0 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Chmp1b1Q99LU0 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Chmp1b1Q99LU0 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
Chmp1b1Q99LU0 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Chmp1b1Q99LU0 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Chmp1b1Q99LU0 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
Chmp1b1Q99LU0 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Chmp1b1Q99LU0 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Chmp1b1Q99LU0 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Chmp1b1Q99LU0 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Chmp1b1Q99LU0 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Chmp1b1Q99LU0 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Chmp1b1Q99LU0 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Chmp1b1Q99LU0 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Chmp1b1Q99LU0 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Chmp1b1Q99LU0 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Chmp1b1Q99LU0 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Chmp1b1Q99LU0 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC14.31□□□□□ -0.12
Chmp1b1Q99LU0 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC14.31□□□□□ -0.12
Chmp1b1Q99LU0 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC14.31□□□□□ -0.12
Chmp1b1Q99LU0 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Chmp1b1Q99LU0 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC14.31□□□□□ -0.12
Chmp1b1Q99LU0 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Chmp1b1Q99LU0 Gm44616-201ENSMUST00000206417 1732 ntBASIC14.31□□□□□ -0.12
Chmp1b1Q99LU0 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Chmp1b1Q99LU0 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Chmp1b1Q99LU0 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Chmp1b1Q99LU0 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Chmp1b1Q99LU0 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Chmp1b1Q99LU0 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Chmp1b1Q99LU0 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Chmp1b1Q99LU0 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Chmp1b1Q99LU0 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Chmp1b1Q99LU0 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Chmp1b1Q99LU0 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Chmp1b1Q99LU0 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Chmp1b1Q99LU0 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Chmp1b1Q99LU0 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Chmp1b1Q99LU0 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Chmp1b1Q99LU0 Gm4535-201ENSMUST00000182274 558 ntBASIC14.3□□□□□ -0.12
Chmp1b1Q99LU0 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Chmp1b1Q99LU0 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Chmp1b1Q99LU0 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Chmp1b1Q99LU0 Gm10355-201ENSMUST00000097146 517 ntBASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 55.6 ms