Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhb1Q91Y08 Best4-ps-201ENSMUST00000129783 1380 ntBASIC15.75■□□□□ 0.11
Pcdhb1Q91Y08 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhb1Q91Y08 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhb1Q91Y08 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC15.74■□□□□ 0.11
Pcdhb1Q91Y08 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhb1Q91Y08 Gm38318-201ENSMUST00000195769 1706 ntBASIC15.74■□□□□ 0.11
Pcdhb1Q91Y08 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhb1Q91Y08 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhb1Q91Y08 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhb1Q91Y08 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhb1Q91Y08 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC15.74■□□□□ 0.11
Pcdhb1Q91Y08 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhb1Q91Y08 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhb1Q91Y08 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhb1Q91Y08 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhb1Q91Y08 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhb1Q91Y08 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhb1Q91Y08 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhb1Q91Y08 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC15.74■□□□□ 0.11
Pcdhb1Q91Y08 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Pcdhb1Q91Y08 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC15.74■□□□□ 0.11
Pcdhb1Q91Y08 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC15.74■□□□□ 0.11
Pcdhb1Q91Y08 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhb1Q91Y08 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhb1Q91Y08 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhb1Q91Y08 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Pcdhb1Q91Y08 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Pcdhb1Q91Y08 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhb1Q91Y08 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhb1Q91Y08 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC15.73■□□□□ 0.11
Pcdhb1Q91Y08 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhb1Q91Y08 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Pcdhb1Q91Y08 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhb1Q91Y08 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhb1Q91Y08 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhb1Q91Y08 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhb1Q91Y08 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhb1Q91Y08 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
Pcdhb1Q91Y08 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhb1Q91Y08 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhb1Q91Y08 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhb1Q91Y08 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhb1Q91Y08 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhb1Q91Y08 Gm29361-201ENSMUST00000183323 2000 ntBASIC15.72■□□□□ 0.11
Pcdhb1Q91Y08 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhb1Q91Y08 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhb1Q91Y08 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhb1Q91Y08 Gm14780-201ENSMUST00000118387 2737 ntBASIC15.72■□□□□ 0.11
Pcdhb1Q91Y08 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Pcdhb1Q91Y08 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhb1Q91Y08 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhb1Q91Y08 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhb1Q91Y08 Gm6184-201ENSMUST00000120403 1261 ntBASIC15.72■□□□□ 0.11
Pcdhb1Q91Y08 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhb1Q91Y08 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC15.72■□□□□ 0.11
Pcdhb1Q91Y08 Gm4899-201ENSMUST00000178708 719 ntBASIC15.72■□□□□ 0.11
Pcdhb1Q91Y08 Gm43767-201ENSMUST00000198933 381 ntBASIC15.72■□□□□ 0.11
Pcdhb1Q91Y08 Gm18195-201ENSMUST00000207604 706 ntBASIC15.72■□□□□ 0.11
Pcdhb1Q91Y08 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC15.72■□□□□ 0.11
Pcdhb1Q91Y08 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhb1Q91Y08 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
Pcdhb1Q91Y08 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhb1Q91Y08 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhb1Q91Y08 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhb1Q91Y08 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhb1Q91Y08 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhb1Q91Y08 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhb1Q91Y08 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhb1Q91Y08 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhb1Q91Y08 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhb1Q91Y08 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdhb1Q91Y08 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdhb1Q91Y08 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdhb1Q91Y08 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC15.71■□□□□ 0.11
Pcdhb1Q91Y08 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdhb1Q91Y08 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdhb1Q91Y08 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdhb1Q91Y08 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdhb1Q91Y08 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
Pcdhb1Q91Y08 Gm13036-201ENSMUST00000117799 748 ntBASIC15.71■□□□□ 0.11
Pcdhb1Q91Y08 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC15.71■□□□□ 0.11
Pcdhb1Q91Y08 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Pcdhb1Q91Y08 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC15.71■□□□□ 0.11
Pcdhb1Q91Y08 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdhb1Q91Y08 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC15.71■□□□□ 0.11
Pcdhb1Q91Y08 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdhb1Q91Y08 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdhb1Q91Y08 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Pcdhb1Q91Y08 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Pcdhb1Q91Y08 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Pcdhb1Q91Y08 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Pcdhb1Q91Y08 Gm43195-201ENSMUST00000200614 2332 ntBASIC15.71■□□□□ 0.1
Pcdhb1Q91Y08 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Pcdhb1Q91Y08 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Pcdhb1Q91Y08 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Pcdhb1Q91Y08 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Pcdhb1Q91Y08 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Pcdhb1Q91Y08 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhb1Q91Y08 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms