Protein–RNA interactions for Protein: Q91XZ5

Pcdhb5, Protocadherin beta 5, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb5Q91XZ5 AC131743.5-201ENSMUST00000220775 1618 ntBASIC17.8■□□□□ 0.44
Pcdhb5Q91XZ5 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
Pcdhb5Q91XZ5 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb5Q91XZ5 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC17.79■□□□□ 0.44
Pcdhb5Q91XZ5 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb5Q91XZ5 Gm14026-201ENSMUST00000120625 1789 ntBASIC17.79■□□□□ 0.44
Pcdhb5Q91XZ5 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb5Q91XZ5 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb5Q91XZ5 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Pcdhb5Q91XZ5 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb5Q91XZ5 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb5Q91XZ5 Gm27618-201ENSMUST00000183671 60 ntBASIC17.79■□□□□ 0.44
Pcdhb5Q91XZ5 Gm27920-201ENSMUST00000183953 96 ntBASIC17.79■□□□□ 0.44
Pcdhb5Q91XZ5 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb5Q91XZ5 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb5Q91XZ5 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb5Q91XZ5 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb5Q91XZ5 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Pcdhb5Q91XZ5 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb5Q91XZ5 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC17.79■□□□□ 0.44
Pcdhb5Q91XZ5 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb5Q91XZ5 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb5Q91XZ5 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Pcdhb5Q91XZ5 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb5Q91XZ5 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb5Q91XZ5 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb5Q91XZ5 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb5Q91XZ5 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Pcdhb5Q91XZ5 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC17.78■□□□□ 0.44
Pcdhb5Q91XZ5 AC069562.2-201ENSMUST00000224644 2146 ntBASIC17.78■□□□□ 0.44
Pcdhb5Q91XZ5 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb5Q91XZ5 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb5Q91XZ5 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb5Q91XZ5 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb5Q91XZ5 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Pcdhb5Q91XZ5 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC17.78■□□□□ 0.44
Pcdhb5Q91XZ5 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC17.78■□□□□ 0.44
Pcdhb5Q91XZ5 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC17.78■□□□□ 0.44
Pcdhb5Q91XZ5 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC17.78■□□□□ 0.44
Pcdhb5Q91XZ5 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb5Q91XZ5 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb5Q91XZ5 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb5Q91XZ5 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Pcdhb5Q91XZ5 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhb5Q91XZ5 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhb5Q91XZ5 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhb5Q91XZ5 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhb5Q91XZ5 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhb5Q91XZ5 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC17.77■□□□□ 0.44
Pcdhb5Q91XZ5 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhb5Q91XZ5 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhb5Q91XZ5 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhb5Q91XZ5 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Pcdhb5Q91XZ5 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhb5Q91XZ5 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Pcdhb5Q91XZ5 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhb5Q91XZ5 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC17.77■□□□□ 0.44
Pcdhb5Q91XZ5 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhb5Q91XZ5 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhb5Q91XZ5 Wdyhv1-206ENSMUST00000227142 786 ntBASIC17.77■□□□□ 0.44
Pcdhb5Q91XZ5 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhb5Q91XZ5 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Pcdhb5Q91XZ5 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC17.77■□□□□ 0.43
Pcdhb5Q91XZ5 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
Pcdhb5Q91XZ5 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Pcdhb5Q91XZ5 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Pcdhb5Q91XZ5 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC17.77■□□□□ 0.43
Pcdhb5Q91XZ5 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
Pcdhb5Q91XZ5 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Pcdhb5Q91XZ5 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Pcdhb5Q91XZ5 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb5Q91XZ5 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb5Q91XZ5 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC17.76■□□□□ 0.43
Pcdhb5Q91XZ5 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb5Q91XZ5 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb5Q91XZ5 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb5Q91XZ5 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb5Q91XZ5 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb5Q91XZ5 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb5Q91XZ5 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb5Q91XZ5 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Pcdhb5Q91XZ5 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
Pcdhb5Q91XZ5 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb5Q91XZ5 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb5Q91XZ5 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb5Q91XZ5 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb5Q91XZ5 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC17.76■□□□□ 0.43
Pcdhb5Q91XZ5 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC17.76■□□□□ 0.43
Pcdhb5Q91XZ5 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb5Q91XZ5 Gm17837-201ENSMUST00000186435 985 ntBASIC17.76■□□□□ 0.43
Pcdhb5Q91XZ5 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC17.76■□□□□ 0.43
Pcdhb5Q91XZ5 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb5Q91XZ5 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb5Q91XZ5 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb5Q91XZ5 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb5Q91XZ5 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb5Q91XZ5 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb5Q91XZ5 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb5Q91XZ5 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb5Q91XZ5 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms