Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trex1Q91XB0 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trex1Q91XB0 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trex1Q91XB0 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Trex1Q91XB0 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Trex1Q91XB0 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trex1Q91XB0 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trex1Q91XB0 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trex1Q91XB0 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC17.29■□□□□ 0.36
Trex1Q91XB0 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Trex1Q91XB0 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC17.29■□□□□ 0.36
Trex1Q91XB0 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Trex1Q91XB0 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Trex1Q91XB0 Gm43767-201ENSMUST00000198933 381 ntBASIC17.29■□□□□ 0.36
Trex1Q91XB0 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Trex1Q91XB0 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trex1Q91XB0 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trex1Q91XB0 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trex1Q91XB0 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC17.29■□□□□ 0.36
Trex1Q91XB0 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trex1Q91XB0 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC17.29■□□□□ 0.36
Trex1Q91XB0 Gm13517-201ENSMUST00000120782 1495 ntBASIC17.29■□□□□ 0.36
Trex1Q91XB0 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trex1Q91XB0 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trex1Q91XB0 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trex1Q91XB0 Gm8242-201ENSMUST00000193029 1420 ntBASIC17.29■□□□□ 0.36
Trex1Q91XB0 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trex1Q91XB0 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trex1Q91XB0 AC163637.1-201ENSMUST00000215491 1894 ntBASIC17.29■□□□□ 0.36
Trex1Q91XB0 Prob1-201ENSMUST00000097619 3021 ntBASIC17.29■□□□□ 0.36
Trex1Q91XB0 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trex1Q91XB0 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trex1Q91XB0 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trex1Q91XB0 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC17.28■□□□□ 0.36
Trex1Q91XB0 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Trex1Q91XB0 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trex1Q91XB0 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trex1Q91XB0 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trex1Q91XB0 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trex1Q91XB0 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trex1Q91XB0 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Trex1Q91XB0 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
Trex1Q91XB0 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
Trex1Q91XB0 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC17.28■□□□□ 0.36
Trex1Q91XB0 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Trex1Q91XB0 Rbfox2-208ENSMUST00000227930 1218 ntBASIC17.28■□□□□ 0.36
Trex1Q91XB0 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trex1Q91XB0 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC17.28■□□□□ 0.36
Trex1Q91XB0 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC17.28■□□□□ 0.36
Trex1Q91XB0 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trex1Q91XB0 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trex1Q91XB0 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trex1Q91XB0 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
Trex1Q91XB0 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trex1Q91XB0 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC17.28■□□□□ 0.36
Trex1Q91XB0 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC17.28■□□□□ 0.36
Trex1Q91XB0 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trex1Q91XB0 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trex1Q91XB0 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Trex1Q91XB0 Gm45412-201ENSMUST00000210217 2275 ntBASIC17.27■□□□□ 0.36
Trex1Q91XB0 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Trex1Q91XB0 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC17.27■□□□□ 0.36
Trex1Q91XB0 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trex1Q91XB0 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC17.27■□□□□ 0.36
Trex1Q91XB0 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC17.27■□□□□ 0.36
Trex1Q91XB0 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trex1Q91XB0 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Trex1Q91XB0 Gm8116-201ENSMUST00000182917 1201 ntBASIC17.27■□□□□ 0.36
Trex1Q91XB0 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trex1Q91XB0 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC17.27■□□□□ 0.36
Trex1Q91XB0 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trex1Q91XB0 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trex1Q91XB0 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trex1Q91XB0 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trex1Q91XB0 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trex1Q91XB0 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC17.27■□□□□ 0.35
Trex1Q91XB0 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
Trex1Q91XB0 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Trex1Q91XB0 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Trex1Q91XB0 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC17.26■□□□□ 0.35
Trex1Q91XB0 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trex1Q91XB0 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
Trex1Q91XB0 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trex1Q91XB0 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trex1Q91XB0 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trex1Q91XB0 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trex1Q91XB0 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trex1Q91XB0 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trex1Q91XB0 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
Trex1Q91XB0 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trex1Q91XB0 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Trex1Q91XB0 Gm12151-201ENSMUST00000121374 290 ntBASIC17.26■□□□□ 0.35
Trex1Q91XB0 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trex1Q91XB0 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC17.26■□□□□ 0.35
Trex1Q91XB0 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trex1Q91XB0 Gm5626-201ENSMUST00000222151 1058 ntBASIC17.26■□□□□ 0.35
Trex1Q91XB0 Wdyhv1-206ENSMUST00000227142 786 ntBASIC17.26■□□□□ 0.35
Trex1Q91XB0 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trex1Q91XB0 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trex1Q91XB0 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms