Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ddx41Q91VN6 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ddx41Q91VN6 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Ddx41Q91VN6 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ddx41Q91VN6 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ddx41Q91VN6 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ddx41Q91VN6 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ddx41Q91VN6 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Ddx41Q91VN6 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ddx41Q91VN6 Gm37305-201ENSMUST00000195714 4279 ntBASIC17.39■□□□□ 0.37
Ddx41Q91VN6 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Ddx41Q91VN6 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
Ddx41Q91VN6 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Ddx41Q91VN6 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Ddx41Q91VN6 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC17.39■□□□□ 0.37
Ddx41Q91VN6 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ddx41Q91VN6 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Ddx41Q91VN6 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ddx41Q91VN6 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ddx41Q91VN6 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ddx41Q91VN6 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ddx41Q91VN6 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Ddx41Q91VN6 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ddx41Q91VN6 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ddx41Q91VN6 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ddx41Q91VN6 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC17.38■□□□□ 0.37
Ddx41Q91VN6 H2af-ps-201ENSMUST00000119066 295 ntBASIC17.38■□□□□ 0.37
Ddx41Q91VN6 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC17.38■□□□□ 0.37
Ddx41Q91VN6 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ddx41Q91VN6 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC17.38■□□□□ 0.37
Ddx41Q91VN6 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ddx41Q91VN6 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ddx41Q91VN6 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ddx41Q91VN6 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ddx41Q91VN6 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ddx41Q91VN6 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ddx41Q91VN6 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ddx41Q91VN6 Best4-ps-201ENSMUST00000129783 1380 ntBASIC17.38■□□□□ 0.37
Ddx41Q91VN6 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Ddx41Q91VN6 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
Ddx41Q91VN6 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ddx41Q91VN6 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ddx41Q91VN6 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ddx41Q91VN6 Gm44291-201ENSMUST00000203102 2865 ntBASIC17.38■□□□□ 0.37
Ddx41Q91VN6 Gm9768-201ENSMUST00000206007 2861 ntBASIC17.38■□□□□ 0.37
Ddx41Q91VN6 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ddx41Q91VN6 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Ddx41Q91VN6 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ddx41Q91VN6 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ddx41Q91VN6 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Ddx41Q91VN6 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ddx41Q91VN6 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Ddx41Q91VN6 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC17.37■□□□□ 0.37
Ddx41Q91VN6 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ddx41Q91VN6 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC17.37■□□□□ 0.37
Ddx41Q91VN6 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC17.37■□□□□ 0.37
Ddx41Q91VN6 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC17.37■□□□□ 0.37
Ddx41Q91VN6 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Ddx41Q91VN6 AC127302.2-201ENSMUST00000215212 268 ntBASIC17.37■□□□□ 0.37
Ddx41Q91VN6 Gm7787-201ENSMUST00000216858 688 ntBASIC17.37■□□□□ 0.37
Ddx41Q91VN6 AC158538.2-201ENSMUST00000225455 906 ntBASIC17.37■□□□□ 0.37
Ddx41Q91VN6 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ddx41Q91VN6 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC17.37■□□□□ 0.37
Ddx41Q91VN6 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ddx41Q91VN6 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Ddx41Q91VN6 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Ddx41Q91VN6 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ddx41Q91VN6 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ddx41Q91VN6 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ddx41Q91VN6 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ddx41Q91VN6 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Ddx41Q91VN6 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ddx41Q91VN6 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Ddx41Q91VN6 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC17.37■□□□□ 0.37
Ddx41Q91VN6 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ddx41Q91VN6 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ddx41Q91VN6 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Ddx41Q91VN6 Grk6-207ENSMUST00000225925 2769 ntBASIC17.36■□□□□ 0.37
Ddx41Q91VN6 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ddx41Q91VN6 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ddx41Q91VN6 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
Ddx41Q91VN6 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ddx41Q91VN6 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Ddx41Q91VN6 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Ddx41Q91VN6 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Ddx41Q91VN6 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Ddx41Q91VN6 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ddx41Q91VN6 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ddx41Q91VN6 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Ddx41Q91VN6 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Ddx41Q91VN6 AC151836.1-202ENSMUST00000226259 753 ntBASIC17.36■□□□□ 0.37
Ddx41Q91VN6 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ddx41Q91VN6 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ddx41Q91VN6 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ddx41Q91VN6 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Ddx41Q91VN6 Gm10710-201ENSMUST00000047876 3971 ntBASIC17.36■□□□□ 0.37
Ddx41Q91VN6 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ddx41Q91VN6 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ddx41Q91VN6 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ddx41Q91VN6 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 64.1 ms