Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.37
H1fooQ8VIK3 Gm27646-201ENSMUST00000183989 110 ntBASIC12.71□□□□□ -0.37
H1fooQ8VIK3 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC12.71□□□□□ -0.37
H1fooQ8VIK3 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC12.71□□□□□ -0.37
H1fooQ8VIK3 Gm6296-201ENSMUST00000222599 943 ntBASIC12.71□□□□□ -0.37
H1fooQ8VIK3 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
H1fooQ8VIK3 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
H1fooQ8VIK3 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
H1fooQ8VIK3 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
H1fooQ8VIK3 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
H1fooQ8VIK3 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
H1fooQ8VIK3 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
H1fooQ8VIK3 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
H1fooQ8VIK3 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
H1fooQ8VIK3 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
H1fooQ8VIK3 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
H1fooQ8VIK3 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
H1fooQ8VIK3 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
H1fooQ8VIK3 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
H1fooQ8VIK3 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
H1fooQ8VIK3 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
H1fooQ8VIK3 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
H1fooQ8VIK3 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
H1fooQ8VIK3 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
H1fooQ8VIK3 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
H1fooQ8VIK3 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
H1fooQ8VIK3 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
H1fooQ8VIK3 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
H1fooQ8VIK3 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
H1fooQ8VIK3 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC12.7□□□□□ -0.38
H1fooQ8VIK3 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
H1fooQ8VIK3 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
H1fooQ8VIK3 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
H1fooQ8VIK3 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC12.7□□□□□ -0.38
H1fooQ8VIK3 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
H1fooQ8VIK3 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC12.7□□□□□ -0.38
H1fooQ8VIK3 Gm8318-201ENSMUST00000182954 872 ntBASIC12.7□□□□□ -0.38
H1fooQ8VIK3 Gm43347-201ENSMUST00000200226 580 ntBASIC12.7□□□□□ -0.38
H1fooQ8VIK3 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
H1fooQ8VIK3 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
H1fooQ8VIK3 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
H1fooQ8VIK3 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
H1fooQ8VIK3 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
H1fooQ8VIK3 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
H1fooQ8VIK3 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
H1fooQ8VIK3 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
H1fooQ8VIK3 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
H1fooQ8VIK3 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
H1fooQ8VIK3 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
H1fooQ8VIK3 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
H1fooQ8VIK3 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
H1fooQ8VIK3 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
H1fooQ8VIK3 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
H1fooQ8VIK3 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC12.69□□□□□ -0.38
H1fooQ8VIK3 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
H1fooQ8VIK3 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
H1fooQ8VIK3 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC12.69□□□□□ -0.38
H1fooQ8VIK3 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
H1fooQ8VIK3 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
H1fooQ8VIK3 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
H1fooQ8VIK3 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
H1fooQ8VIK3 Gm11780-201ENSMUST00000136880 516 ntBASIC12.69□□□□□ -0.38
H1fooQ8VIK3 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
H1fooQ8VIK3 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC12.69□□□□□ -0.38
H1fooQ8VIK3 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC12.69□□□□□ -0.38
H1fooQ8VIK3 AC159301.1-201ENSMUST00000225130 1182 ntBASIC12.69□□□□□ -0.38
H1fooQ8VIK3 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
H1fooQ8VIK3 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
H1fooQ8VIK3 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
H1fooQ8VIK3 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
H1fooQ8VIK3 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
H1fooQ8VIK3 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
H1fooQ8VIK3 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
H1fooQ8VIK3 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
H1fooQ8VIK3 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC12.69□□□□□ -0.38
H1fooQ8VIK3 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
H1fooQ8VIK3 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
H1fooQ8VIK3 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
H1fooQ8VIK3 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
H1fooQ8VIK3 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
H1fooQ8VIK3 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
H1fooQ8VIK3 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
H1fooQ8VIK3 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
H1fooQ8VIK3 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
H1fooQ8VIK3 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
H1fooQ8VIK3 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
H1fooQ8VIK3 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
H1fooQ8VIK3 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
H1fooQ8VIK3 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC12.68□□□□□ -0.38
H1fooQ8VIK3 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
H1fooQ8VIK3 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC12.68□□□□□ -0.38
H1fooQ8VIK3 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
H1fooQ8VIK3 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC12.68□□□□□ -0.38
H1fooQ8VIK3 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
H1fooQ8VIK3 Gm13418-201ENSMUST00000119097 944 ntBASIC12.68□□□□□ -0.38
H1fooQ8VIK3 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC12.68□□□□□ -0.38
H1fooQ8VIK3 Gm44357-201ENSMUST00000195897 142 ntBASIC12.68□□□□□ -0.38
H1fooQ8VIK3 Gm19658-201ENSMUST00000196231 138 ntBASIC12.68□□□□□ -0.38
H1fooQ8VIK3 Gm44367-201ENSMUST00000196836 138 ntBASIC12.68□□□□□ -0.38
H1fooQ8VIK3 Gm44350-201ENSMUST00000197197 138 ntBASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms