Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC16.08■□□□□ 0.17
TraipQ8VIG6 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
TraipQ8VIG6 Pbld1-202ENSMUST00000178684 2404 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
TraipQ8VIG6 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.17
TraipQ8VIG6 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
TraipQ8VIG6 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
TraipQ8VIG6 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
TraipQ8VIG6 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
TraipQ8VIG6 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TraipQ8VIG6 Gm27528-202ENSMUST00000222916 2012 ntBASIC16.08■□□□□ 0.16
TraipQ8VIG6 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TraipQ8VIG6 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
TraipQ8VIG6 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC16.08■□□□□ 0.16
TraipQ8VIG6 AC124732.2-201ENSMUST00000221977 316 ntBASIC16.08■□□□□ 0.16
TraipQ8VIG6 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TraipQ8VIG6 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TraipQ8VIG6 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC16.08■□□□□ 0.16
TraipQ8VIG6 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TraipQ8VIG6 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC16.08■□□□□ 0.16
TraipQ8VIG6 Gm42934-201ENSMUST00000196920 1345 ntBASIC16.08■□□□□ 0.16
TraipQ8VIG6 Gm6018-201ENSMUST00000216090 1306 ntBASIC16.08■□□□□ 0.16
TraipQ8VIG6 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TraipQ8VIG6 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TraipQ8VIG6 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TraipQ8VIG6 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
TraipQ8VIG6 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
TraipQ8VIG6 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TraipQ8VIG6 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TraipQ8VIG6 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
TraipQ8VIG6 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TraipQ8VIG6 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TraipQ8VIG6 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
TraipQ8VIG6 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
TraipQ8VIG6 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TraipQ8VIG6 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TraipQ8VIG6 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
TraipQ8VIG6 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TraipQ8VIG6 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TraipQ8VIG6 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TraipQ8VIG6 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TraipQ8VIG6 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
TraipQ8VIG6 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC16.07■□□□□ 0.16
TraipQ8VIG6 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TraipQ8VIG6 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
TraipQ8VIG6 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TraipQ8VIG6 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
TraipQ8VIG6 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
TraipQ8VIG6 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
TraipQ8VIG6 Gm7336-201ENSMUST00000107041 1232 ntBASIC16.07■□□□□ 0.16
TraipQ8VIG6 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TraipQ8VIG6 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
TraipQ8VIG6 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TraipQ8VIG6 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TraipQ8VIG6 Gm8597-201ENSMUST00000191525 1109 ntBASIC16.07■□□□□ 0.16
TraipQ8VIG6 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TraipQ8VIG6 AC139382.1-201ENSMUST00000221402 498 ntBASIC16.07■□□□□ 0.16
TraipQ8VIG6 Fgf17-202ENSMUST00000227123 1336 ntBASIC16.07■□□□□ 0.16
TraipQ8VIG6 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TraipQ8VIG6 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TraipQ8VIG6 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TraipQ8VIG6 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
TraipQ8VIG6 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TraipQ8VIG6 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TraipQ8VIG6 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TraipQ8VIG6 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TraipQ8VIG6 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC16.07■□□□□ 0.16
TraipQ8VIG6 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TraipQ8VIG6 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
TraipQ8VIG6 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TraipQ8VIG6 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TraipQ8VIG6 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TraipQ8VIG6 Gm38376-201ENSMUST00000195493 2253 ntBASIC16.06■□□□□ 0.16
TraipQ8VIG6 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC16.06■□□□□ 0.16
TraipQ8VIG6 AC131743.5-201ENSMUST00000220775 1618 ntBASIC16.06■□□□□ 0.16
TraipQ8VIG6 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TraipQ8VIG6 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TraipQ8VIG6 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TraipQ8VIG6 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TraipQ8VIG6 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TraipQ8VIG6 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TraipQ8VIG6 Gm24158-201ENSMUST00000175263 71 ntBASIC16.06■□□□□ 0.16
TraipQ8VIG6 AC159114.1-201ENSMUST00000220349 266 ntBASIC16.06■□□□□ 0.16
TraipQ8VIG6 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TraipQ8VIG6 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TraipQ8VIG6 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC16.06■□□□□ 0.16
TraipQ8VIG6 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
TraipQ8VIG6 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TraipQ8VIG6 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
TraipQ8VIG6 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TraipQ8VIG6 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
TraipQ8VIG6 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TraipQ8VIG6 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TraipQ8VIG6 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TraipQ8VIG6 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TraipQ8VIG6 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
TraipQ8VIG6 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TraipQ8VIG6 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TraipQ8VIG6 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TraipQ8VIG6 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TraipQ8VIG6 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC16.05■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms