Protein–RNA interactions for Protein: Q8R2Q0

Trim29, Tripartite motif-containing protein 29, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim29Q8R2Q0 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trim29Q8R2Q0 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
Trim29Q8R2Q0 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Trim29Q8R2Q0 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim29Q8R2Q0 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim29Q8R2Q0 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim29Q8R2Q0 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim29Q8R2Q0 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trim29Q8R2Q0 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim29Q8R2Q0 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Trim29Q8R2Q0 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim29Q8R2Q0 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trim29Q8R2Q0 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Trim29Q8R2Q0 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim29Q8R2Q0 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Trim29Q8R2Q0 Gm5253-201ENSMUST00000187104 1025 ntBASIC17.31■□□□□ 0.36
Trim29Q8R2Q0 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim29Q8R2Q0 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim29Q8R2Q0 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim29Q8R2Q0 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC17.31■□□□□ 0.36
Trim29Q8R2Q0 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Trim29Q8R2Q0 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim29Q8R2Q0 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim29Q8R2Q0 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trim29Q8R2Q0 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim29Q8R2Q0 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC17.31■□□□□ 0.36
Trim29Q8R2Q0 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim29Q8R2Q0 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC17.31■□□□□ 0.36
Trim29Q8R2Q0 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trim29Q8R2Q0 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC17.31■□□□□ 0.36
Trim29Q8R2Q0 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Trim29Q8R2Q0 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim29Q8R2Q0 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim29Q8R2Q0 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Trim29Q8R2Q0 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Trim29Q8R2Q0 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim29Q8R2Q0 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim29Q8R2Q0 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim29Q8R2Q0 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim29Q8R2Q0 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim29Q8R2Q0 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim29Q8R2Q0 Gm13884-201ENSMUST00000118103 829 ntBASIC17.3■□□□□ 0.36
Trim29Q8R2Q0 Gm11764-201ENSMUST00000120221 623 ntBASIC17.3■□□□□ 0.36
Trim29Q8R2Q0 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC17.3■□□□□ 0.36
Trim29Q8R2Q0 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Trim29Q8R2Q0 Gm10499-201ENSMUST00000174094 934 ntBASIC17.3■□□□□ 0.36
Trim29Q8R2Q0 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Trim29Q8R2Q0 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC17.3■□□□□ 0.36
Trim29Q8R2Q0 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC17.3■□□□□ 0.36
Trim29Q8R2Q0 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC17.3■□□□□ 0.36
Trim29Q8R2Q0 Gm9682-201ENSMUST00000197505 556 ntBASIC17.3■□□□□ 0.36
Trim29Q8R2Q0 Gm10060-201ENSMUST00000212002 111 ntBASIC17.3■□□□□ 0.36
Trim29Q8R2Q0 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC17.3■□□□□ 0.36
Trim29Q8R2Q0 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim29Q8R2Q0 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim29Q8R2Q0 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Trim29Q8R2Q0 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Trim29Q8R2Q0 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim29Q8R2Q0 Gm45293-201ENSMUST00000209754 1812 ntBASIC17.3■□□□□ 0.36
Trim29Q8R2Q0 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim29Q8R2Q0 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim29Q8R2Q0 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Trim29Q8R2Q0 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim29Q8R2Q0 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim29Q8R2Q0 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim29Q8R2Q0 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim29Q8R2Q0 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim29Q8R2Q0 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim29Q8R2Q0 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim29Q8R2Q0 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC17.29■□□□□ 0.36
Trim29Q8R2Q0 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Trim29Q8R2Q0 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Trim29Q8R2Q0 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC17.29■□□□□ 0.36
Trim29Q8R2Q0 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Trim29Q8R2Q0 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Trim29Q8R2Q0 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Trim29Q8R2Q0 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim29Q8R2Q0 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim29Q8R2Q0 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim29Q8R2Q0 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim29Q8R2Q0 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim29Q8R2Q0 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim29Q8R2Q0 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Trim29Q8R2Q0 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Trim29Q8R2Q0 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trim29Q8R2Q0 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim29Q8R2Q0 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim29Q8R2Q0 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Trim29Q8R2Q0 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Trim29Q8R2Q0 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Trim29Q8R2Q0 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Trim29Q8R2Q0 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim29Q8R2Q0 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC17.28■□□□□ 0.36
Trim29Q8R2Q0 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trim29Q8R2Q0 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim29Q8R2Q0 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trim29Q8R2Q0 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trim29Q8R2Q0 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC17.28■□□□□ 0.36
Trim29Q8R2Q0 Gm5682-201ENSMUST00000173402 505 ntBASIC17.28■□□□□ 0.36
Trim29Q8R2Q0 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC17.28■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms