Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC19.31■□□□□ 0.68
Chmp7Q8R1T1 Gm17837-201ENSMUST00000186435 985 ntBASIC19.31■□□□□ 0.68
Chmp7Q8R1T1 Gm18049-201ENSMUST00000208909 581 ntBASIC19.31■□□□□ 0.68
Chmp7Q8R1T1 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC19.31■□□□□ 0.68
Chmp7Q8R1T1 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Chmp7Q8R1T1 CT025535.1-201ENSMUST00000227172 491 ntBASIC19.31■□□□□ 0.68
Chmp7Q8R1T1 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
Chmp7Q8R1T1 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Chmp7Q8R1T1 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Chmp7Q8R1T1 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Chmp7Q8R1T1 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Chmp7Q8R1T1 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Chmp7Q8R1T1 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Chmp7Q8R1T1 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Chmp7Q8R1T1 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Chmp7Q8R1T1 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Chmp7Q8R1T1 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Chmp7Q8R1T1 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Chmp7Q8R1T1 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Chmp7Q8R1T1 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Chmp7Q8R1T1 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC19.3■□□□□ 0.68
Chmp7Q8R1T1 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Chmp7Q8R1T1 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Chmp7Q8R1T1 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Chmp7Q8R1T1 Gm12151-201ENSMUST00000121374 290 ntBASIC19.3■□□□□ 0.68
Chmp7Q8R1T1 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC19.3■□□□□ 0.68
Chmp7Q8R1T1 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Chmp7Q8R1T1 Gm8116-201ENSMUST00000182917 1201 ntBASIC19.3■□□□□ 0.68
Chmp7Q8R1T1 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Chmp7Q8R1T1 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Chmp7Q8R1T1 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Chmp7Q8R1T1 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC19.3■□□□□ 0.68
Chmp7Q8R1T1 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC19.3■□□□□ 0.68
Chmp7Q8R1T1 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Chmp7Q8R1T1 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Chmp7Q8R1T1 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Chmp7Q8R1T1 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Chmp7Q8R1T1 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC19.29■□□□□ 0.68
Chmp7Q8R1T1 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Chmp7Q8R1T1 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
Chmp7Q8R1T1 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Chmp7Q8R1T1 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Chmp7Q8R1T1 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Chmp7Q8R1T1 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Chmp7Q8R1T1 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Chmp7Q8R1T1 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Chmp7Q8R1T1 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Chmp7Q8R1T1 Gm38294-201ENSMUST00000192831 381 ntBASIC19.29■□□□□ 0.68
Chmp7Q8R1T1 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Chmp7Q8R1T1 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Chmp7Q8R1T1 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Chmp7Q8R1T1 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Chmp7Q8R1T1 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC19.29■□□□□ 0.68
Chmp7Q8R1T1 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Chmp7Q8R1T1 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Chmp7Q8R1T1 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Chmp7Q8R1T1 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Chmp7Q8R1T1 Ptprs-211ENSMUST00000223859 5588 ntBASIC19.29■□□□□ 0.68
Chmp7Q8R1T1 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC19.29■□□□□ 0.68
Chmp7Q8R1T1 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Chmp7Q8R1T1 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Chmp7Q8R1T1 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Chmp7Q8R1T1 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Chmp7Q8R1T1 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Chmp7Q8R1T1 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
Chmp7Q8R1T1 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC19.28■□□□□ 0.68
Chmp7Q8R1T1 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Chmp7Q8R1T1 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC19.28■□□□□ 0.68
Chmp7Q8R1T1 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC19.28■□□□□ 0.68
Chmp7Q8R1T1 Klk2-ps-201ENSMUST00000205342 571 ntBASIC19.28■□□□□ 0.68
Chmp7Q8R1T1 AC069562.2-201ENSMUST00000224644 2146 ntBASIC19.28■□□□□ 0.68
Chmp7Q8R1T1 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Chmp7Q8R1T1 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Chmp7Q8R1T1 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Chmp7Q8R1T1 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Chmp7Q8R1T1 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Chmp7Q8R1T1 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Chmp7Q8R1T1 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Chmp7Q8R1T1 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Chmp7Q8R1T1 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Chmp7Q8R1T1 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.68
Chmp7Q8R1T1 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC19.27■□□□□ 0.68
Chmp7Q8R1T1 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
Chmp7Q8R1T1 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC19.27■□□□□ 0.68
Chmp7Q8R1T1 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC19.27■□□□□ 0.68
Chmp7Q8R1T1 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Chmp7Q8R1T1 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Chmp7Q8R1T1 Gm13015-201ENSMUST00000118674 204 ntBASIC19.27■□□□□ 0.68
Chmp7Q8R1T1 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Chmp7Q8R1T1 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC19.27■□□□□ 0.68
Chmp7Q8R1T1 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Chmp7Q8R1T1 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC19.27■□□□□ 0.68
Chmp7Q8R1T1 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC19.27■□□□□ 0.68
Chmp7Q8R1T1 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Chmp7Q8R1T1 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Chmp7Q8R1T1 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Chmp7Q8R1T1 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Chmp7Q8R1T1 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Chmp7Q8R1T1 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Chmp7Q8R1T1 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms