Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC16.2■□□□□ 0.18
Rpp40Q8R1F9 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rpp40Q8R1F9 Gm27397-201ENSMUST00000184997 107 ntBASIC16.2■□□□□ 0.18
Rpp40Q8R1F9 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC16.2■□□□□ 0.18
Rpp40Q8R1F9 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rpp40Q8R1F9 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rpp40Q8R1F9 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC16.2■□□□□ 0.18
Rpp40Q8R1F9 Gm10154-201ENSMUST00000084445 354 ntBASIC16.2■□□□□ 0.18
Rpp40Q8R1F9 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Rpp40Q8R1F9 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rpp40Q8R1F9 Gm5648-201ENSMUST00000122244 1587 ntBASIC16.2■□□□□ 0.18
Rpp40Q8R1F9 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Rpp40Q8R1F9 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rpp40Q8R1F9 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rpp40Q8R1F9 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Rpp40Q8R1F9 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rpp40Q8R1F9 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rpp40Q8R1F9 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Rpp40Q8R1F9 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Rpp40Q8R1F9 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rpp40Q8R1F9 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rpp40Q8R1F9 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rpp40Q8R1F9 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rpp40Q8R1F9 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rpp40Q8R1F9 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rpp40Q8R1F9 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rpp40Q8R1F9 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rpp40Q8R1F9 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rpp40Q8R1F9 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Rpp40Q8R1F9 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Rpp40Q8R1F9 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rpp40Q8R1F9 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC16.19■□□□□ 0.18
Rpp40Q8R1F9 Gm6226-201ENSMUST00000117765 1146 ntBASIC16.19■□□□□ 0.18
Rpp40Q8R1F9 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC16.19■□□□□ 0.18
Rpp40Q8R1F9 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC16.19■□□□□ 0.18
Rpp40Q8R1F9 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC16.19■□□□□ 0.18
Rpp40Q8R1F9 Gm43767-201ENSMUST00000198933 381 ntBASIC16.19■□□□□ 0.18
Rpp40Q8R1F9 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC16.19■□□□□ 0.18
Rpp40Q8R1F9 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Rpp40Q8R1F9 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Rpp40Q8R1F9 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Rpp40Q8R1F9 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Rpp40Q8R1F9 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rpp40Q8R1F9 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rpp40Q8R1F9 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Rpp40Q8R1F9 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC16.19■□□□□ 0.18
Rpp40Q8R1F9 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC16.18■□□□□ 0.18
Rpp40Q8R1F9 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Rpp40Q8R1F9 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rpp40Q8R1F9 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rpp40Q8R1F9 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rpp40Q8R1F9 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rpp40Q8R1F9 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rpp40Q8R1F9 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rpp40Q8R1F9 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Rpp40Q8R1F9 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC16.18■□□□□ 0.18
Rpp40Q8R1F9 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC16.18■□□□□ 0.18
Rpp40Q8R1F9 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC16.18■□□□□ 0.18
Rpp40Q8R1F9 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Rpp40Q8R1F9 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC16.18■□□□□ 0.18
Rpp40Q8R1F9 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rpp40Q8R1F9 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rpp40Q8R1F9 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Rpp40Q8R1F9 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rpp40Q8R1F9 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rpp40Q8R1F9 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rpp40Q8R1F9 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rpp40Q8R1F9 Gm13410-201ENSMUST00000117058 1415 ntBASIC16.18■□□□□ 0.18
Rpp40Q8R1F9 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rpp40Q8R1F9 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rpp40Q8R1F9 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rpp40Q8R1F9 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rpp40Q8R1F9 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rpp40Q8R1F9 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rpp40Q8R1F9 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rpp40Q8R1F9 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rpp40Q8R1F9 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Rpp40Q8R1F9 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rpp40Q8R1F9 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC16.17■□□□□ 0.18
Rpp40Q8R1F9 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC16.17■□□□□ 0.18
Rpp40Q8R1F9 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC16.17■□□□□ 0.18
Rpp40Q8R1F9 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC16.17■□□□□ 0.18
Rpp40Q8R1F9 Gm2756-201ENSMUST00000195851 400 ntBASIC16.17■□□□□ 0.18
Rpp40Q8R1F9 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rpp40Q8R1F9 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC16.17■□□□□ 0.18
Rpp40Q8R1F9 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rpp40Q8R1F9 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rpp40Q8R1F9 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC16.17■□□□□ 0.18
Rpp40Q8R1F9 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC16.17■□□□□ 0.18
Rpp40Q8R1F9 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rpp40Q8R1F9 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rpp40Q8R1F9 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rpp40Q8R1F9 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rpp40Q8R1F9 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rpp40Q8R1F9 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rpp40Q8R1F9 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Rpp40Q8R1F9 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Rpp40Q8R1F9 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rpp40Q8R1F9 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rpp40Q8R1F9 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms