Protein–RNA interactions for Protein: Q8R043

Smim29, Uncharacterized protein SMIM29, mousemouse

Predictions only

Length 75 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim29Q8R043 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC9.65□□□□□ -0.87
Smim29Q8R043 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC9.65□□□□□ -0.87
Smim29Q8R043 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.87
Smim29Q8R043 Gm43509-201ENSMUST00000196551 2594 ntBASIC9.65□□□□□ -0.87
Smim29Q8R043 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Smim29Q8R043 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC9.65□□□□□ -0.87
Smim29Q8R043 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.87
Smim29Q8R043 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Smim29Q8R043 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC9.65□□□□□ -0.87
Smim29Q8R043 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC9.64□□□□□ -0.87
Smim29Q8R043 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Smim29Q8R043 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Smim29Q8R043 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Smim29Q8R043 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC9.64□□□□□ -0.87
Smim29Q8R043 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Smim29Q8R043 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Smim29Q8R043 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Smim29Q8R043 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
Smim29Q8R043 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Smim29Q8R043 Gm37297-201ENSMUST00000192974 2384 ntBASIC9.64□□□□□ -0.87
Smim29Q8R043 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Smim29Q8R043 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Smim29Q8R043 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC9.64□□□□□ -0.87
Smim29Q8R043 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Smim29Q8R043 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
Smim29Q8R043 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Smim29Q8R043 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Smim29Q8R043 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Smim29Q8R043 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Smim29Q8R043 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Smim29Q8R043 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC9.64□□□□□ -0.87
Smim29Q8R043 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Smim29Q8R043 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Smim29Q8R043 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Smim29Q8R043 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Smim29Q8R043 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Smim29Q8R043 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC9.64□□□□□ -0.87
Smim29Q8R043 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC9.64□□□□□ -0.87
Smim29Q8R043 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC9.64□□□□□ -0.87
Smim29Q8R043 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Smim29Q8R043 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC9.64□□□□□ -0.87
Smim29Q8R043 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Smim29Q8R043 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Smim29Q8R043 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Smim29Q8R043 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Smim29Q8R043 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Smim29Q8R043 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC9.64□□□□□ -0.87
Smim29Q8R043 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Smim29Q8R043 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Smim29Q8R043 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Smim29Q8R043 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Smim29Q8R043 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Smim29Q8R043 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC9.64□□□□□ -0.87
Smim29Q8R043 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Smim29Q8R043 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Smim29Q8R043 Gm8242-201ENSMUST00000193029 1420 ntBASIC9.64□□□□□ -0.87
Smim29Q8R043 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC9.64□□□□□ -0.87
Smim29Q8R043 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Smim29Q8R043 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Smim29Q8R043 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Smim29Q8R043 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Smim29Q8R043 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Smim29Q8R043 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
Smim29Q8R043 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Smim29Q8R043 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Smim29Q8R043 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Smim29Q8R043 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Smim29Q8R043 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Smim29Q8R043 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Smim29Q8R043 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Smim29Q8R043 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC9.63□□□□□ -0.87
Smim29Q8R043 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Smim29Q8R043 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Smim29Q8R043 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Smim29Q8R043 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC9.63□□□□□ -0.87
Smim29Q8R043 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
Smim29Q8R043 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC9.63□□□□□ -0.87
Smim29Q8R043 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Smim29Q8R043 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Smim29Q8R043 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Smim29Q8R043 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Smim29Q8R043 Gm7935-201ENSMUST00000100555 1278 ntBASIC9.63□□□□□ -0.87
Smim29Q8R043 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Smim29Q8R043 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC9.63□□□□□ -0.87
Smim29Q8R043 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC9.63□□□□□ -0.87
Smim29Q8R043 Gm7286-201ENSMUST00000182691 1007 ntBASIC9.63□□□□□ -0.87
Smim29Q8R043 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC9.63□□□□□ -0.87
Smim29Q8R043 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC9.63□□□□□ -0.87
Smim29Q8R043 Gm45504-201ENSMUST00000211407 2107 ntBASIC9.63□□□□□ -0.87
Smim29Q8R043 AC158538.1-201ENSMUST00000225870 294 ntBASIC9.63□□□□□ -0.87
Smim29Q8R043 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Smim29Q8R043 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Smim29Q8R043 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
Smim29Q8R043 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Smim29Q8R043 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Smim29Q8R043 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
Smim29Q8R043 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Smim29Q8R043 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Smim29Q8R043 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Smim29Q8R043 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC9.63□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms