Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cchcr1Q8K2I2 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cchcr1Q8K2I2 Gm11453-201ENSMUST00000117318 1007 ntBASIC17.92■□□□□ 0.46
Cchcr1Q8K2I2 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC17.92■□□□□ 0.46
Cchcr1Q8K2I2 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cchcr1Q8K2I2 Gm2308-201ENSMUST00000166539 1004 ntBASIC17.92■□□□□ 0.46
Cchcr1Q8K2I2 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC17.92■□□□□ 0.46
Cchcr1Q8K2I2 Ank2-226ENSMUST00000189368 339 ntBASIC17.92■□□□□ 0.46
Cchcr1Q8K2I2 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC17.92■□□□□ 0.46
Cchcr1Q8K2I2 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC17.92■□□□□ 0.46
Cchcr1Q8K2I2 AC159301.1-201ENSMUST00000225130 1182 ntBASIC17.92■□□□□ 0.46
Cchcr1Q8K2I2 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cchcr1Q8K2I2 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cchcr1Q8K2I2 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Cchcr1Q8K2I2 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC17.92■□□□□ 0.46
Cchcr1Q8K2I2 Efs-202ENSMUST00000227037 2540 ntBASIC17.92■□□□□ 0.46
Cchcr1Q8K2I2 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cchcr1Q8K2I2 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
Cchcr1Q8K2I2 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Cchcr1Q8K2I2 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cchcr1Q8K2I2 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cchcr1Q8K2I2 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC17.91■□□□□ 0.46
Cchcr1Q8K2I2 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC17.91■□□□□ 0.46
Cchcr1Q8K2I2 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cchcr1Q8K2I2 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Cchcr1Q8K2I2 Gm45605-201ENSMUST00000210265 4269 ntBASIC17.91■□□□□ 0.46
Cchcr1Q8K2I2 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cchcr1Q8K2I2 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cchcr1Q8K2I2 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC17.91■□□□□ 0.46
Cchcr1Q8K2I2 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Cchcr1Q8K2I2 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
Cchcr1Q8K2I2 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC17.91■□□□□ 0.46
Cchcr1Q8K2I2 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cchcr1Q8K2I2 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cchcr1Q8K2I2 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cchcr1Q8K2I2 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cchcr1Q8K2I2 Gm38318-201ENSMUST00000195769 1706 ntBASIC17.91■□□□□ 0.46
Cchcr1Q8K2I2 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cchcr1Q8K2I2 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cchcr1Q8K2I2 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cchcr1Q8K2I2 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cchcr1Q8K2I2 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cchcr1Q8K2I2 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cchcr1Q8K2I2 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC17.91■□□□□ 0.46
Cchcr1Q8K2I2 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cchcr1Q8K2I2 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Cchcr1Q8K2I2 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cchcr1Q8K2I2 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cchcr1Q8K2I2 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cchcr1Q8K2I2 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Cchcr1Q8K2I2 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cchcr1Q8K2I2 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
Cchcr1Q8K2I2 Camk2g-217ENSMUST00000226630 1937 ntBASIC17.9■□□□□ 0.46
Cchcr1Q8K2I2 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Cchcr1Q8K2I2 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cchcr1Q8K2I2 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Cchcr1Q8K2I2 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cchcr1Q8K2I2 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cchcr1Q8K2I2 Gm18489-201ENSMUST00000172565 551 ntBASIC17.9■□□□□ 0.46
Cchcr1Q8K2I2 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC17.9■□□□□ 0.46
Cchcr1Q8K2I2 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cchcr1Q8K2I2 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cchcr1Q8K2I2 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cchcr1Q8K2I2 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cchcr1Q8K2I2 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Cchcr1Q8K2I2 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Cchcr1Q8K2I2 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Cchcr1Q8K2I2 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cchcr1Q8K2I2 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Cchcr1Q8K2I2 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cchcr1Q8K2I2 Gm14780-201ENSMUST00000118387 2737 ntBASIC17.9■□□□□ 0.46
Cchcr1Q8K2I2 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cchcr1Q8K2I2 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Cchcr1Q8K2I2 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Cchcr1Q8K2I2 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cchcr1Q8K2I2 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cchcr1Q8K2I2 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Cchcr1Q8K2I2 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC17.89■□□□□ 0.45
Cchcr1Q8K2I2 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC17.89■□□□□ 0.45
Cchcr1Q8K2I2 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Cchcr1Q8K2I2 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC17.89■□□□□ 0.45
Cchcr1Q8K2I2 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC17.89■□□□□ 0.45
Cchcr1Q8K2I2 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC17.89■□□□□ 0.45
Cchcr1Q8K2I2 Spr-ps1-201ENSMUST00000089584 605 ntBASIC17.89■□□□□ 0.45
Cchcr1Q8K2I2 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Cchcr1Q8K2I2 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cchcr1Q8K2I2 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.45
Cchcr1Q8K2I2 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cchcr1Q8K2I2 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cchcr1Q8K2I2 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cchcr1Q8K2I2 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cchcr1Q8K2I2 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cchcr1Q8K2I2 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC17.88■□□□□ 0.45
Cchcr1Q8K2I2 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC17.88■□□□□ 0.45
Cchcr1Q8K2I2 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cchcr1Q8K2I2 Gm10499-201ENSMUST00000174094 934 ntBASIC17.88■□□□□ 0.45
Cchcr1Q8K2I2 Gm28033-201ENSMUST00000184224 96 ntBASIC17.88■□□□□ 0.45
Cchcr1Q8K2I2 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC17.88■□□□□ 0.45
Cchcr1Q8K2I2 AC159106.1-201ENSMUST00000224421 690 ntBASIC17.88■□□□□ 0.45
Cchcr1Q8K2I2 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms