Protein–RNA interactions for Protein: Q8CHX7

Rftn2, Raftlin-2, mousemouse

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rftn2Q8CHX7 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC16.03■□□□□ 0.16
Rftn2Q8CHX7 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Rftn2Q8CHX7 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Rftn2Q8CHX7 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC16.03■□□□□ 0.16
Rftn2Q8CHX7 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Rftn2Q8CHX7 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rftn2Q8CHX7 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Rftn2Q8CHX7 Gm11839-201ENSMUST00000120647 1953 ntBASIC16.03■□□□□ 0.16
Rftn2Q8CHX7 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rftn2Q8CHX7 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rftn2Q8CHX7 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rftn2Q8CHX7 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rftn2Q8CHX7 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rftn2Q8CHX7 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Rftn2Q8CHX7 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rftn2Q8CHX7 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Rftn2Q8CHX7 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rftn2Q8CHX7 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Rftn2Q8CHX7 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC16.03■□□□□ 0.16
Rftn2Q8CHX7 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rftn2Q8CHX7 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rftn2Q8CHX7 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rftn2Q8CHX7 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rftn2Q8CHX7 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rftn2Q8CHX7 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rftn2Q8CHX7 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rftn2Q8CHX7 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Rftn2Q8CHX7 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rftn2Q8CHX7 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC16.02■□□□□ 0.16
Rftn2Q8CHX7 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC16.02■□□□□ 0.16
Rftn2Q8CHX7 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Rftn2Q8CHX7 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Rftn2Q8CHX7 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Rftn2Q8CHX7 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Rftn2Q8CHX7 AC131710.1-201ENSMUST00000228336 990 ntBASIC16.02■□□□□ 0.16
Rftn2Q8CHX7 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rftn2Q8CHX7 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Rftn2Q8CHX7 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Rftn2Q8CHX7 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Rftn2Q8CHX7 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
Rftn2Q8CHX7 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Rftn2Q8CHX7 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC16.02■□□□□ 0.15
Rftn2Q8CHX7 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Rftn2Q8CHX7 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Rftn2Q8CHX7 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Rftn2Q8CHX7 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC16.01■□□□□ 0.15
Rftn2Q8CHX7 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Rftn2Q8CHX7 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rftn2Q8CHX7 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rftn2Q8CHX7 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Rftn2Q8CHX7 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rftn2Q8CHX7 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rftn2Q8CHX7 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rftn2Q8CHX7 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rftn2Q8CHX7 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rftn2Q8CHX7 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rftn2Q8CHX7 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rftn2Q8CHX7 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rftn2Q8CHX7 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC16.01■□□□□ 0.15
Rftn2Q8CHX7 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC16.01■□□□□ 0.15
Rftn2Q8CHX7 Gm25925-201ENSMUST00000158314 306 ntBASIC16.01■□□□□ 0.15
Rftn2Q8CHX7 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC16.01■□□□□ 0.15
Rftn2Q8CHX7 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC16.01■□□□□ 0.15
Rftn2Q8CHX7 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC16.01■□□□□ 0.15
Rftn2Q8CHX7 AC140397.2-201ENSMUST00000224213 834 ntBASIC16.01■□□□□ 0.15
Rftn2Q8CHX7 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC16.01■□□□□ 0.15
Rftn2Q8CHX7 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Rftn2Q8CHX7 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rftn2Q8CHX7 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rftn2Q8CHX7 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rftn2Q8CHX7 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rftn2Q8CHX7 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rftn2Q8CHX7 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
Rftn2Q8CHX7 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rftn2Q8CHX7 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC16.01■□□□□ 0.15
Rftn2Q8CHX7 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Rftn2Q8CHX7 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC16■□□□□ 0.15
Rftn2Q8CHX7 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Rftn2Q8CHX7 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC16■□□□□ 0.15
Rftn2Q8CHX7 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Rftn2Q8CHX7 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Rftn2Q8CHX7 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Rftn2Q8CHX7 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Rftn2Q8CHX7 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC16■□□□□ 0.15
Rftn2Q8CHX7 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Rftn2Q8CHX7 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Rftn2Q8CHX7 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Rftn2Q8CHX7 Gm22065-201ENSMUST00000103753 110 ntBASIC16■□□□□ 0.15
Rftn2Q8CHX7 Gm22066-201ENSMUST00000103761 110 ntBASIC16■□□□□ 0.15
Rftn2Q8CHX7 Gm24932-201ENSMUST00000103763 110 ntBASIC16■□□□□ 0.15
Rftn2Q8CHX7 Gm24115-201ENSMUST00000103799 110 ntBASIC16■□□□□ 0.15
Rftn2Q8CHX7 Gm22190-201ENSMUST00000103827 110 ntBASIC16■□□□□ 0.15
Rftn2Q8CHX7 Gm22191-201ENSMUST00000103831 110 ntBASIC16■□□□□ 0.15
Rftn2Q8CHX7 Gm24721-201ENSMUST00000103849 110 ntBASIC16■□□□□ 0.15
Rftn2Q8CHX7 Gm28018-201ENSMUST00000103869 110 ntBASIC16■□□□□ 0.15
Rftn2Q8CHX7 Gm26399-201ENSMUST00000103937 110 ntBASIC16■□□□□ 0.15
Rftn2Q8CHX7 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Rftn2Q8CHX7 Gm2810-201ENSMUST00000118681 990 ntBASIC16■□□□□ 0.15
Rftn2Q8CHX7 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC16■□□□□ 0.15
Rftn2Q8CHX7 Gm25349-201ENSMUST00000177728 110 ntBASIC16■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms