Protein–RNA interactions for Protein: Q8CHD8

Rab11fip3, Rab11 family-interacting protein 3, mousemouse

Predictions only

Length 1,047 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip3Q8CHD8 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Rab11fip3Q8CHD8 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rab11fip3Q8CHD8 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rab11fip3Q8CHD8 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rab11fip3Q8CHD8 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rab11fip3Q8CHD8 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Rab11fip3Q8CHD8 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rab11fip3Q8CHD8 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC19.55■□□□□ 0.72
Rab11fip3Q8CHD8 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rab11fip3Q8CHD8 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Rab11fip3Q8CHD8 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rab11fip3Q8CHD8 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC19.55■□□□□ 0.72
Rab11fip3Q8CHD8 Gm8597-201ENSMUST00000191525 1109 ntBASIC19.55■□□□□ 0.72
Rab11fip3Q8CHD8 Gm8242-201ENSMUST00000193029 1420 ntBASIC19.55■□□□□ 0.72
Rab11fip3Q8CHD8 Gm10253-201ENSMUST00000194270 940 ntBASIC19.55■□□□□ 0.72
Rab11fip3Q8CHD8 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC19.55■□□□□ 0.72
Rab11fip3Q8CHD8 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rab11fip3Q8CHD8 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rab11fip3Q8CHD8 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rab11fip3Q8CHD8 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Rab11fip3Q8CHD8 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rab11fip3Q8CHD8 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Rab11fip3Q8CHD8 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rab11fip3Q8CHD8 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rab11fip3Q8CHD8 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rab11fip3Q8CHD8 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rab11fip3Q8CHD8 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC19.55■□□□□ 0.72
Rab11fip3Q8CHD8 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rab11fip3Q8CHD8 AC131743.5-201ENSMUST00000220775 1618 ntBASIC19.54■□□□□ 0.72
Rab11fip3Q8CHD8 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rab11fip3Q8CHD8 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC19.54■□□□□ 0.72
Rab11fip3Q8CHD8 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rab11fip3Q8CHD8 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rab11fip3Q8CHD8 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rab11fip3Q8CHD8 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC19.54■□□□□ 0.72
Rab11fip3Q8CHD8 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rab11fip3Q8CHD8 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rab11fip3Q8CHD8 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rab11fip3Q8CHD8 Mir449b-201ENSMUST00000104833 80 ntBASIC19.54■□□□□ 0.72
Rab11fip3Q8CHD8 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Rab11fip3Q8CHD8 Mir6956-201ENSMUST00000183598 62 ntBASIC19.54■□□□□ 0.72
Rab11fip3Q8CHD8 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Rab11fip3Q8CHD8 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Rab11fip3Q8CHD8 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Rab11fip3Q8CHD8 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rab11fip3Q8CHD8 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rab11fip3Q8CHD8 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rab11fip3Q8CHD8 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Rab11fip3Q8CHD8 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC19.54■□□□□ 0.72
Rab11fip3Q8CHD8 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Rab11fip3Q8CHD8 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC19.53■□□□□ 0.72
Rab11fip3Q8CHD8 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rab11fip3Q8CHD8 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rab11fip3Q8CHD8 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rab11fip3Q8CHD8 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC19.53■□□□□ 0.72
Rab11fip3Q8CHD8 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Rab11fip3Q8CHD8 Gm24158-201ENSMUST00000175263 71 ntBASIC19.53■□□□□ 0.72
Rab11fip3Q8CHD8 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC19.53■□□□□ 0.72
Rab11fip3Q8CHD8 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rab11fip3Q8CHD8 AC166341.4-201ENSMUST00000220625 123 ntBASIC19.53■□□□□ 0.72
Rab11fip3Q8CHD8 AC139382.1-201ENSMUST00000221402 498 ntBASIC19.53■□□□□ 0.72
Rab11fip3Q8CHD8 AC124732.2-201ENSMUST00000221977 316 ntBASIC19.53■□□□□ 0.72
Rab11fip3Q8CHD8 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Rab11fip3Q8CHD8 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rab11fip3Q8CHD8 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rab11fip3Q8CHD8 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Rab11fip3Q8CHD8 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rab11fip3Q8CHD8 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Rab11fip3Q8CHD8 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Rab11fip3Q8CHD8 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Rab11fip3Q8CHD8 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rab11fip3Q8CHD8 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rab11fip3Q8CHD8 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rab11fip3Q8CHD8 Fgf17-202ENSMUST00000227123 1336 ntBASIC19.52■□□□□ 0.72
Rab11fip3Q8CHD8 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rab11fip3Q8CHD8 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC19.52■□□□□ 0.72
Rab11fip3Q8CHD8 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rab11fip3Q8CHD8 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rab11fip3Q8CHD8 Gm16011-201ENSMUST00000121567 2662 ntBASIC19.52■□□□□ 0.72
Rab11fip3Q8CHD8 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC19.52■□□□□ 0.72
Rab11fip3Q8CHD8 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Rab11fip3Q8CHD8 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rab11fip3Q8CHD8 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC19.52■□□□□ 0.72
Rab11fip3Q8CHD8 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC19.52■□□□□ 0.72
Rab11fip3Q8CHD8 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rab11fip3Q8CHD8 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Rab11fip3Q8CHD8 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC19.52■□□□□ 0.71
Rab11fip3Q8CHD8 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Rab11fip3Q8CHD8 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Rab11fip3Q8CHD8 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
Rab11fip3Q8CHD8 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Rab11fip3Q8CHD8 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC19.52■□□□□ 0.71
Rab11fip3Q8CHD8 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Rab11fip3Q8CHD8 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
Rab11fip3Q8CHD8 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Rab11fip3Q8CHD8 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rab11fip3Q8CHD8 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Rab11fip3Q8CHD8 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rab11fip3Q8CHD8 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Rab11fip3Q8CHD8 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms