Protein–RNA interactions for Protein: Q8CGV4

Rdh1, MCG140848, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh1Q8CGV4 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rdh1Q8CGV4 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rdh1Q8CGV4 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rdh1Q8CGV4 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rdh1Q8CGV4 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rdh1Q8CGV4 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
Rdh1Q8CGV4 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC14.67□□□□□ -0.06
Rdh1Q8CGV4 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC14.67□□□□□ -0.06
Rdh1Q8CGV4 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Rdh1Q8CGV4 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC14.67□□□□□ -0.06
Rdh1Q8CGV4 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC14.67□□□□□ -0.06
Rdh1Q8CGV4 Mir6990-201ENSMUST00000183724 91 ntBASIC14.67□□□□□ -0.06
Rdh1Q8CGV4 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Rdh1Q8CGV4 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC14.67□□□□□ -0.06
Rdh1Q8CGV4 AC164567.1-201ENSMUST00000219185 960 ntBASIC14.67□□□□□ -0.06
Rdh1Q8CGV4 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
Rdh1Q8CGV4 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Rdh1Q8CGV4 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Rdh1Q8CGV4 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
Rdh1Q8CGV4 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC14.67□□□□□ -0.06
Rdh1Q8CGV4 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rdh1Q8CGV4 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rdh1Q8CGV4 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Rdh1Q8CGV4 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rdh1Q8CGV4 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Rdh1Q8CGV4 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rdh1Q8CGV4 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC14.66□□□□□ -0.06
Rdh1Q8CGV4 Celf4-206ENSMUST00000224553 1729 ntBASIC14.66□□□□□ -0.06
Rdh1Q8CGV4 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rdh1Q8CGV4 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rdh1Q8CGV4 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rdh1Q8CGV4 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rdh1Q8CGV4 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Rdh1Q8CGV4 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC14.66□□□□□ -0.06
Rdh1Q8CGV4 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rdh1Q8CGV4 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rdh1Q8CGV4 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Rdh1Q8CGV4 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rdh1Q8CGV4 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rdh1Q8CGV4 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Rdh1Q8CGV4 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Rdh1Q8CGV4 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Rdh1Q8CGV4 CT030684.1-201ENSMUST00000227292 914 ntBASIC14.66□□□□□ -0.06
Rdh1Q8CGV4 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rdh1Q8CGV4 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rdh1Q8CGV4 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rdh1Q8CGV4 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Rdh1Q8CGV4 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rdh1Q8CGV4 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Rdh1Q8CGV4 Gm27528-202ENSMUST00000222916 2012 ntBASIC14.66□□□□□ -0.06
Rdh1Q8CGV4 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rdh1Q8CGV4 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Rdh1Q8CGV4 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rdh1Q8CGV4 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rdh1Q8CGV4 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Rdh1Q8CGV4 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rdh1Q8CGV4 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rdh1Q8CGV4 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rdh1Q8CGV4 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rdh1Q8CGV4 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Rdh1Q8CGV4 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rdh1Q8CGV4 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Rdh1Q8CGV4 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Rdh1Q8CGV4 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Rdh1Q8CGV4 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rdh1Q8CGV4 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rdh1Q8CGV4 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rdh1Q8CGV4 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rdh1Q8CGV4 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Rdh1Q8CGV4 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Rdh1Q8CGV4 Gm16026-204ENSMUST00000162652 683 ntBASIC14.65□□□□□ -0.06
Rdh1Q8CGV4 Gm43767-201ENSMUST00000198933 381 ntBASIC14.65□□□□□ -0.06
Rdh1Q8CGV4 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC14.65□□□□□ -0.06
Rdh1Q8CGV4 Gm43125-201ENSMUST00000201724 730 ntBASIC14.65□□□□□ -0.06
Rdh1Q8CGV4 Gm18057-201ENSMUST00000208220 503 ntBASIC14.65□□□□□ -0.06
Rdh1Q8CGV4 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rdh1Q8CGV4 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rdh1Q8CGV4 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rdh1Q8CGV4 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rdh1Q8CGV4 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC14.65□□□□□ -0.06
Rdh1Q8CGV4 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
Rdh1Q8CGV4 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Rdh1Q8CGV4 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC14.65□□□□□ -0.06
Rdh1Q8CGV4 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rdh1Q8CGV4 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Rdh1Q8CGV4 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rdh1Q8CGV4 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rdh1Q8CGV4 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Rdh1Q8CGV4 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rdh1Q8CGV4 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Rdh1Q8CGV4 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rdh1Q8CGV4 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rdh1Q8CGV4 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Rdh1Q8CGV4 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rdh1Q8CGV4 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Rdh1Q8CGV4 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC14.64□□□□□ -0.07
Rdh1Q8CGV4 Gm12017-201ENSMUST00000122453 1003 ntBASIC14.64□□□□□ -0.07
Rdh1Q8CGV4 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
Rdh1Q8CGV4 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Rdh1Q8CGV4 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC14.64□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms