Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Trim9Q8C7M3 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Trim9Q8C7M3 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.26
Trim9Q8C7M3 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Trim9Q8C7M3 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim9Q8C7M3 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Trim9Q8C7M3 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trim9Q8C7M3 Camk2g-217ENSMUST00000226630 1937 ntBASIC16.7■□□□□ 0.26
Trim9Q8C7M3 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trim9Q8C7M3 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trim9Q8C7M3 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC16.7■□□□□ 0.26
Trim9Q8C7M3 Gm12350-201ENSMUST00000121208 462 ntBASIC16.7■□□□□ 0.26
Trim9Q8C7M3 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC16.7■□□□□ 0.26
Trim9Q8C7M3 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Trim9Q8C7M3 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC16.7■□□□□ 0.26
Trim9Q8C7M3 Gm42670-201ENSMUST00000201816 1292 ntBASIC16.7■□□□□ 0.26
Trim9Q8C7M3 Gm18246-201ENSMUST00000221023 728 ntBASIC16.7■□□□□ 0.26
Trim9Q8C7M3 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim9Q8C7M3 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC16.7■□□□□ 0.26
Trim9Q8C7M3 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim9Q8C7M3 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim9Q8C7M3 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim9Q8C7M3 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim9Q8C7M3 Gm5366-201ENSMUST00000215494 1338 ntBASIC16.7■□□□□ 0.26
Trim9Q8C7M3 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim9Q8C7M3 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim9Q8C7M3 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim9Q8C7M3 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim9Q8C7M3 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Trim9Q8C7M3 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Trim9Q8C7M3 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim9Q8C7M3 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trim9Q8C7M3 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trim9Q8C7M3 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim9Q8C7M3 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim9Q8C7M3 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim9Q8C7M3 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim9Q8C7M3 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Trim9Q8C7M3 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim9Q8C7M3 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Trim9Q8C7M3 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim9Q8C7M3 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trim9Q8C7M3 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Trim9Q8C7M3 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trim9Q8C7M3 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trim9Q8C7M3 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trim9Q8C7M3 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trim9Q8C7M3 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trim9Q8C7M3 AC164567.1-201ENSMUST00000219185 960 ntBASIC16.69■□□□□ 0.26
Trim9Q8C7M3 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim9Q8C7M3 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim9Q8C7M3 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Trim9Q8C7M3 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim9Q8C7M3 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC16.69■□□□□ 0.26
Trim9Q8C7M3 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Trim9Q8C7M3 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim9Q8C7M3 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim9Q8C7M3 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trim9Q8C7M3 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC16.69■□□□□ 0.26
Trim9Q8C7M3 Gm13294-201ENSMUST00000121757 1330 ntBASIC16.69■□□□□ 0.26
Trim9Q8C7M3 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim9Q8C7M3 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim9Q8C7M3 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim9Q8C7M3 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Trim9Q8C7M3 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC16.68■□□□□ 0.26
Trim9Q8C7M3 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Trim9Q8C7M3 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim9Q8C7M3 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim9Q8C7M3 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim9Q8C7M3 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim9Q8C7M3 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim9Q8C7M3 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim9Q8C7M3 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trim9Q8C7M3 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim9Q8C7M3 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim9Q8C7M3 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC16.68■□□□□ 0.26
Trim9Q8C7M3 Gm27741-201ENSMUST00000185060 237 ntBASIC16.68■□□□□ 0.26
Trim9Q8C7M3 AC084391.1-201ENSMUST00000200651 141 ntBASIC16.68■□□□□ 0.26
Trim9Q8C7M3 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC16.68■□□□□ 0.26
Trim9Q8C7M3 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim9Q8C7M3 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim9Q8C7M3 Gm10313-201ENSMUST00000095320 1002 ntBASIC16.68■□□□□ 0.26
Trim9Q8C7M3 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim9Q8C7M3 Mxra8os-201ENSMUST00000097740 687 ntBASIC16.68■□□□□ 0.26
Trim9Q8C7M3 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim9Q8C7M3 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trim9Q8C7M3 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim9Q8C7M3 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim9Q8C7M3 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim9Q8C7M3 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim9Q8C7M3 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim9Q8C7M3 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim9Q8C7M3 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim9Q8C7M3 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim9Q8C7M3 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC16.67■□□□□ 0.26
Trim9Q8C7M3 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trim9Q8C7M3 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trim9Q8C7M3 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim9Q8C7M3 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim9Q8C7M3 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms