Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col6a6Q8C6K9 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Col6a6Q8C6K9 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col6a6Q8C6K9 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col6a6Q8C6K9 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col6a6Q8C6K9 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col6a6Q8C6K9 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Col6a6Q8C6K9 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col6a6Q8C6K9 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col6a6Q8C6K9 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col6a6Q8C6K9 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Col6a6Q8C6K9 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC13.64□□□□□ -0.23
Col6a6Q8C6K9 Gm27533-201ENSMUST00000183800 152 ntBASIC13.64□□□□□ -0.23
Col6a6Q8C6K9 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC13.64□□□□□ -0.23
Col6a6Q8C6K9 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col6a6Q8C6K9 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col6a6Q8C6K9 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col6a6Q8C6K9 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Col6a6Q8C6K9 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC13.64□□□□□ -0.23
Col6a6Q8C6K9 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC13.64□□□□□ -0.23
Col6a6Q8C6K9 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col6a6Q8C6K9 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col6a6Q8C6K9 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Col6a6Q8C6K9 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col6a6Q8C6K9 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col6a6Q8C6K9 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col6a6Q8C6K9 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Col6a6Q8C6K9 Gm3365-201ENSMUST00000216296 1480 ntBASIC13.63□□□□□ -0.23
Col6a6Q8C6K9 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
Col6a6Q8C6K9 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Col6a6Q8C6K9 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col6a6Q8C6K9 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col6a6Q8C6K9 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col6a6Q8C6K9 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC13.63□□□□□ -0.23
Col6a6Q8C6K9 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Col6a6Q8C6K9 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Col6a6Q8C6K9 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Col6a6Q8C6K9 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Col6a6Q8C6K9 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col6a6Q8C6K9 Gm8116-201ENSMUST00000182917 1201 ntBASIC13.63□□□□□ -0.23
Col6a6Q8C6K9 Gm6473-201ENSMUST00000188572 1210 ntBASIC13.63□□□□□ -0.23
Col6a6Q8C6K9 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC13.63□□□□□ -0.23
Col6a6Q8C6K9 Gm6218-201ENSMUST00000219812 628 ntBASIC13.63□□□□□ -0.23
Col6a6Q8C6K9 Gm9063-201ENSMUST00000223299 582 ntBASIC13.63□□□□□ -0.23
Col6a6Q8C6K9 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col6a6Q8C6K9 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col6a6Q8C6K9 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col6a6Q8C6K9 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col6a6Q8C6K9 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Col6a6Q8C6K9 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col6a6Q8C6K9 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Col6a6Q8C6K9 Gm22189-201ENSMUST00000103822 86 ntBASIC13.62□□□□□ -0.23
Col6a6Q8C6K9 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Col6a6Q8C6K9 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC13.62□□□□□ -0.23
Col6a6Q8C6K9 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC13.62□□□□□ -0.23
Col6a6Q8C6K9 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col6a6Q8C6K9 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col6a6Q8C6K9 Prkcz2-201ENSMUST00000206136 1756 ntBASIC13.62□□□□□ -0.23
Col6a6Q8C6K9 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col6a6Q8C6K9 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Col6a6Q8C6K9 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col6a6Q8C6K9 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col6a6Q8C6K9 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Col6a6Q8C6K9 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col6a6Q8C6K9 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Col6a6Q8C6K9 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col6a6Q8C6K9 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC13.62□□□□□ -0.23
Col6a6Q8C6K9 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col6a6Q8C6K9 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col6a6Q8C6K9 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Col6a6Q8C6K9 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC13.62□□□□□ -0.23
Col6a6Q8C6K9 Ighv8-7-201ENSMUST00000194349 297 ntBASIC13.62□□□□□ -0.23
Col6a6Q8C6K9 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col6a6Q8C6K9 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC13.62□□□□□ -0.23
Col6a6Q8C6K9 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col6a6Q8C6K9 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Col6a6Q8C6K9 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col6a6Q8C6K9 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col6a6Q8C6K9 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Col6a6Q8C6K9 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col6a6Q8C6K9 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Col6a6Q8C6K9 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col6a6Q8C6K9 Gm15222-202ENSMUST00000228667 1726 ntBASIC13.62□□□□□ -0.23
Col6a6Q8C6K9 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col6a6Q8C6K9 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col6a6Q8C6K9 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Col6a6Q8C6K9 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col6a6Q8C6K9 Gm14928-201ENSMUST00000120198 477 ntBASIC13.61□□□□□ -0.23
Col6a6Q8C6K9 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
Col6a6Q8C6K9 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Col6a6Q8C6K9 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Col6a6Q8C6K9 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Col6a6Q8C6K9 Gm29667-201ENSMUST00000190817 490 ntBASIC13.61□□□□□ -0.23
Col6a6Q8C6K9 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Col6a6Q8C6K9 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col6a6Q8C6K9 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col6a6Q8C6K9 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col6a6Q8C6K9 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Col6a6Q8C6K9 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC13.61□□□□□ -0.23
Col6a6Q8C6K9 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms